RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 DPPA2Q7Z7J5 298 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 WDFY1Q8IWB7 410 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF100Q8IYN0 542 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 STX19Q8N4C7 294 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ACBD7Q8N6N7 88 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 SYT14Q8NB59 555 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 PROKR2Q8NFJ6 384 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 BBS1Q8NFJ9 593 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR51G2Q8NGK0 314 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR52I1Q8NGK6 324 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR9Q1Q8NGQ5 310 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR6K6Q8NGW6 343 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR2T27Q8NH04 317 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 HAVCR2Q8TDQ0 301 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 APH1AQ96BI3 265 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZMYND19Q96E35 227 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 CNN2Q99439 309 aaKnown RBP3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF649Q9BS31 505 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 C19orf24Q9BVV8 132 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 SFXN3Q9BWM7 321 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 MRPS26Q9BYN8 205 aaKnown RBP3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ULBP2Q9BZM5 246 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 YIPF3Q9GZM5 350 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 SIAEQ9HAT2 523 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 VCX3AQ9NNX9 186 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF629Q9UEG4 869 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 UGT2A1Q9Y4X1 527 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 FAM215AQ9Y5M1 114 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 COMMD3-BMI1R4GMX3 469 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZFYVE26Q68DK2 2539 aa3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 KMT2BQ9UMN6 2715 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P19-201ENST00000403971 CHD3Q12873 2000 aaKnown RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ABCA4P78363 2273 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 IGKV1D-43A0A0B4J1Z2 117 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 C12orf71A8MTZ7 269 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF99A8MXY4 864 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 UPK3AO75631 287 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 TNFSF13O75888 250 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 SULT1C4O75897 302 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 FARS2O95363 451 aaKnown RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 LY6G6DO95868 133 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 RPSAP08865 295 aaKnown RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 CST2P09228 141 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 LIMS3P0CW19 117 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 LIMS4P0CW20 117 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF823P16415 610 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 MYL12AP19105 171 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ALOX5APP20292 161 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 COX5AP20674 150 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 MSR1P21757 451 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 PCMT1P22061 227 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ACTA2P62736 377 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ACTG2P63267 376 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 HIST1H3AP68431 136 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 TGFBR3Q03167 851 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 FMODQ06828 376 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 MRPL28Q13084 256 aaKnown RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 PHYHD1Q5SRE7 291 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 SYT6Q5T7P8 510 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 HIST2H3PS2Q5TEC6 136 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 UBE2UQ5VVX9 321 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF544Q6NX49 715 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 DEGS2Q6QHC5 323 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 TFAP2EQ6VUC0 442 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 PLEKHG7Q6ZR37 379 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 Q6ZT83 130 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 HIST2H3AQ71DI3 136 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 SSX8Q7RTT4 187 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 TMEM17Q86X19 198 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 CEND1Q8N111 149 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 SYS1Q8N2H4 156 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR4F15Q8NGB8 312 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR51L1Q8NGJ5 315 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 OR52N1Q8NH53 320 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 OTOSQ8NHW6 89 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ASB17Q8WXJ9 295 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 C11orf40Q8WZ69 217 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 STARD4Q96DR4 205 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 MND1Q9BWT6 205 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 RERGLQ9H628 205 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 NIPAL2Q9H841 368 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 CRLF2Q9HC73 371 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 PALMDQ9NP74 551 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ISYNA1Q9NPH2 558 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 POLE4Q9NR33 117 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 SLC35D1Q9NTN3 355 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 TMEM38BQ9NVV0 291 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 MRPL22Q9NWU5 206 aaKnown RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 CYB5R1Q9UHQ9 305 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ATPIF1Q9UII2 106 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 CLEC4AQ9UMR7 237 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ERGIC3Q9Y282 383 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 CAB39Q9Y376 341 aaPredicted RBP3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 KIF25-AS1Q9Y6Z4 181 aa3.54□□□□□ -1.84
HMGB3P19-201ENST00000403971 ANKHD1Q8IWZ3 2542 aaKnown RBP3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ARPC4-TTLL3A0A0A6YYG9 625 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 A0A1B0GUH1 482 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 DAPL1A0PJW8 107 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 TVP23AA6NH52 213 aa3.53□□□□□ -1.84
HMGB3P19-201ENST00000403971 ZNF670-ZNF695F2Z2N8 137 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms