RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SHANK1Q9Y566 2161 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 BCL2L11O43521 198 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 SPRY3O43610 288 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 B3GALNT1O75752 331 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 PET100P0DJ07 73 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 WFDC8Q8IUA0 241 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 FOXRED2Q8IWF2 684 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 UBALD1Q8TB05 177 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 OR2V2Q96R30 315 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 USB1Q9BQ65 265 aaKnown RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 ERRFI1Q9UJM3 462 aaPredicted RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
SNX2-201ENST00000379516 HEATR1Q9H583 2144 aaKnown RBP12.68□□□□□ -0.38
SNX2-201ENST00000379516 PTPRQQ9UMZ3 2332 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 ANKRD34BA5PLL1 514 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 SELENOVP59797 346 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 RND3P61587 244 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 MEX3BQ6ZN04 569 aaKnown RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 LDLRAD3Q86YD5 345 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 C18orf12Q96KH6 178 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 GPHA2Q96T91 129 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 MRPL37Q9BZE1 423 aaKnown RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 MBNL3Q9NUK0 354 aaKnown RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 JKAMPQ9P055 326 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 TMEM30CPA0ZSE6 113 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 LINC00862A6NCI5 91 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 HSPA12AO43301 675 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 LYL1P12980 280 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 NUP62P37198 522 aaPredicted RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 UBA52P62987 128 aaKnown RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 AESQ08117 197 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 TMEM108Q6UXF1 575 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 CMTM1Q8IZ96 169 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 LHFPL5Q8TAF8 219 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 PRR7Q8TB68 274 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 SCARB1Q8WTV0 552 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 RND1Q92730 232 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 MEGF10Q96KG7 1140 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 ZNF471Q9BX82 626 aaPredicted RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 TAF9BQ9HBM6 251 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 TUBD1Q9UJT1 453 aa12.67□□□□□ -0.38
SNX2-201ENST00000379516 UBE2J1Q9Y385 318 aaPredicted RBP12.67□□□□□ -0.38
SNX2-201ENST00000379516 COL10A1Q03692 680 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 SPRNQ5BIV9 151 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 TMEM268Q5VZI3 342 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 BOLLQ8N9W6 283 aaKnown RBP12.66□□□□□ -0.38
SNX2-201ENST00000379516 OR1S1Q8NH92 325 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 ST8SIA2Q92186 375 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 TMEM222Q9H0R3 208 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 KCNIP1Q9NZI2 227 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
SNX2-201ENST00000379516 NPIPB11E5RHQ5 1161 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 F5H0A9 414 aaPredicted RBP12.65□□□□□ -0.38
SNX2-201ENST00000379516 IFNL4K9M1U5 179 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 TNFSF12O43508 249 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 SCGB1D2O95969 90 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 EGR1P18146 543 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
SNX2-201ENST00000379516 MOGAT3Q86VF5 341 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 ARPC5LQ9BPX5 153 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 LEUTXA8MZ59 168 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 SRRM5B3KS81 715 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 RLN2P04090 185 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 PTAFRP25105 342 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 GABRA2P47869 451 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 SRPXP78539 464 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 SMCO1Q147U7 214 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 HMGN3Q15651 99 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 OR10V1Q8NGI7 309 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 LSM5Q9Y4Y9 91 aaKnown RBP12.65□□□□□ -0.38
SNX2-201ENST00000379516 ZGRF1Q86YA3 2104 aa12.65□□□□□ -0.38
SNX2-201ENST00000379516 TUBAL3A6NHL2 446 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 MSGN1A6NI15 193 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 ABCD4O14678 606 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 THBDP07204 575 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 S100GP29377 79 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 PRDX2P32119 198 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 OR3A1P47881 315 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 ZNF695Q8IW36 515 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 CD177Q8N6Q3 437 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 NUP37Q8NFH4 326 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 OR10Z1Q8NGY1 313 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 ITLN1Q8WWA0 313 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 VKORC1Q9BQB6 163 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 DNAJB11Q9UBS4 358 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 TMED3Q9Y3Q3 217 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 RBM7Q9Y580 266 aaKnown RBP12.64□□□□□ -0.39
SNX2-201ENST00000379516 IGF2RP11717 2491 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 DPRXA6NFQ7 191 aa12.64□□□□□ -0.39
SNX2-201ENST00000379516 PGLYRP1O75594 196 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms