RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 LSM5Q9Y4Y9 91 aaKnown RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 POMT1Q9Y6A1 747 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 HSPB6O14558 160 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 HS3ST1O14792 307 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 GPR137BO60478 399 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 WDR1O75083 606 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 SCGB1D2O95969 90 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 IGLV1-44P01699 117 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 MBPP02686 304 aaPredicted RBP11.9□□□□□ -0.5
USF1-202ENST00000368020 KITLGP21583 273 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 UCP1P25874 307 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 ZNF154Q13106 437 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 HERPUD1Q15011 391 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 TMEM268Q5VZI3 342 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 IL34Q6ZMJ4 242 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 FOXRED2Q8IWF2 684 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 GAPTQ8N292 157 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 SLC35G3Q8N808 338 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 Q8NA96 180 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 UBAC2Q8NBM4 344 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 LILRB1Q8NHL6 650 aaPredicted RBP11.9□□□□□ -0.5
USF1-202ENST00000368020 RDH5Q92781 318 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 HS3ST6Q96QI5 342 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 TP53RKQ96S44 253 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 CXXC4Q9H2H0 198 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 LPAR3Q9UBY5 353 aa11.9□□□□□ -0.5
USF1-202ENST00000368020 RHBDL1O75783 438 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 MMP9P14780 707 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 BLOC1S1P78537 153 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 PSG7Q13046 419 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 C3orf36Q3SXR2 165 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNF718Q3SXZ3 478 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 KRTCAP3Q53RY4 240 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNF324BQ6AW86 544 aaPredicted RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 VWA1Q6PCB0 445 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNF497Q6ZNH5 498 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 MYPOPQ86VE0 399 aaPredicted RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 H1FOOQ8IZA3 346 aaPredicted RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 WDR31Q8NA23 367 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 AKR1E2Q96JD6 320 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 DMRTA2Q96SC8 542 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 TAAR3PQ9P1P4 343 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 PURGQ9UJV8 347 aaKnown RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 SLC33A1O00400 549 aaPredicted RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNHIT1O43257 154 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 KCNAB3O43448 404 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNF205O95201 554 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 OR2H2O95918 312 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 VDAC1P21796 283 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 GCH1P30793 250 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 KLRB1Q12918 225 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 PCSK4Q6UW60 755 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 FAM180AQ6UWF9 173 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 MEX3BQ6ZN04 569 aaKnown RBP11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNF818PQ6ZRF7 136 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 GALNT11Q8NCW6 608 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ZNF488Q96MN9 340 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 MMP26Q9NRE1 261 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ASF1BQ9NVP2 202 aa11.89□□□□□ -0.51
USF1-202ENST00000368020 ITPR1Q14643 2758 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 A0A1W2PR80 420 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 ZSCAN5BA6NJL1 495 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 TNFSF13O75888 250 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
USF1-202ENST00000368020 SLC25A6P12236 298 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 TMEM33P57088 247 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 TUSC1Q2TAM9 212 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
USF1-202ENST00000368020 WDR86Q86TI4 376 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 TLNRD1Q9H1K6 362 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 OR2S2Q9NQN1 319 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 FBXL17Q9UF56 701 aa11.88□□□□□ -0.51
USF1-202ENST00000368020 IGKV1-6A0A0C4DH72 117 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 OR5H1A6NKK0 313 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 ZNF705EA8MWA4 302 aaPredicted RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 CDIPTO14735 213 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 TIMM8AO60220 97 aaPredicted RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 CGAP01215 116 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 NKX2-1P43699 371 aaPredicted RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 SULT1A2P50226 295 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 CXorf67Q86X51 503 aaPredicted RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 OR1S2Q8NGQ3 325 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 STARD4Q96DR4 205 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 FAM212BQ9NTI7 297 aaPredicted RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 MBNL3Q9NUK0 354 aaKnown RBP11.87□□□□□ -0.51
USF1-202ENST00000368020 KCNIP1Q9NZI2 227 aa11.87□□□□□ -0.51
USF1-202ENST00000368020 TRAPPC2LQ9UL33 140 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms