RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FAM90A12PA8MX19 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A5PA8MXJ8 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 LY6LH3BQJ8 138 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 CCRL2O00421 344 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 CD2P06729 351 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A15PP0C7V4 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A13PP0C7W8 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A14PP0C7W9 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FAM90A24PP0C7X0 464 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 GP9P14770 177 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 MYF6P23409 242 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 DCKP27707 260 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 CD34P28906 385 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 PTGFRP43088 359 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 SRSF7Q16629 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX55-202ENST00000354291 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 RPL22L1Q6P5R6 122 aaKnown RBP12.36□□□□□ -0.43
DDX55-202ENST00000354291 ZNF429Q86V71 674 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 SATL1Q86VE3 508 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 ZNF565Q8N9K5 539 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 GPR148Q8TDV2 347 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 APH1BQ8WW43 257 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 GPER1Q99527 375 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 NCOR1P1Q9H4R4 102 aa12.36□□□□□ -0.43
DDX55-202ENST00000354291 FGF20Q9NP95 211 aaPredicted RBP12.36□□□□□ -0.43
DDX55-202ENST00000354291 SMPD3Q9NY59 655 aaPredicted RBP12.36□□□□□ -0.43
DDX55-202ENST00000354291 OOSP1A8MZH6 123 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 H0YJX3 145 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 AP4M1O00189 453 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 FGF16O43320 207 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 BAG2O95816 211 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 GDNFP39905 211 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 GTF2A1P52655 376 aaPredicted RBP12.35□□□□□ -0.43
DDX55-202ENST00000354291 FOXE3Q13461 319 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 ZNF529Q6P280 563 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 TMPRSS11AQ6ZMR5 421 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 OR51T1Q8NGJ9 327 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 RPEQ96AT9 228 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 COQ2Q96H96 371 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 NR1H4Q96RI1 486 aaPredicted RBP12.35□□□□□ -0.43
DDX55-202ENST00000354291 BARHL1Q9BZE3 327 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
DDX55-202ENST00000354291 A0A087X0M5 115 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 KBTBD11-OT1A0A1B0GTJ5 212 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 A0A1B0GX30 115 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 SAP30O75446 220 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 WBP4O75554 376 aaKnown RBP12.34□□□□□ -0.43
DDX55-202ENST00000354291 ELANEP08246 267 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 C21orf33P30042 268 aaPredicted RBP12.34□□□□□ -0.43
DDX55-202ENST00000354291 SOX2P48431 317 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 FHL3Q13643 280 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 IL13RA2Q14627 380 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 ATXN7L3Q14CW9 347 aaPredicted RBP12.34□□□□□ -0.43
DDX55-202ENST00000354291 RSU1Q15404 277 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 SMN1Q16637 294 aaKnown RBP12.34□□□□□ -0.43
DDX55-202ENST00000354291 ZSCAN26Q16670 478 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 PAN3Q58A45 887 aaKnown RBP12.34□□□□□ -0.43
DDX55-202ENST00000354291 OR1N2Q8NGR9 330 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 CNIH3Q8TBE1 160 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 TNFAIP8L1Q8WVP5 186 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 TOMM40LQ969M1 308 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 GON7Q9BXV9 100 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 ISYNA1Q9NPH2 558 aa12.34□□□□□ -0.43
DDX55-202ENST00000354291 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
DDX55-202ENST00000354291 GABRPO00591 440 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 CGB3P0DN86 165 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 CGB7P0DN87 165 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 KCNJ3P48549 501 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 ETV1P50549 477 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 C17orf58Q2M2W7 97 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 UTF1Q5T230 341 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 ASCL4Q6XD76 172 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 OR51A2Q8NGJ7 313 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 PPIL3Q9H2H8 161 aaKnown RBP12.33□□□□□ -0.44
DDX55-202ENST00000354291 TMEM138Q9NPI0 162 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 BABAM2Q9NXR7 383 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 TAS2R4Q9NYW5 299 aa12.33□□□□□ -0.44
DDX55-202ENST00000354291 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 TRAV24A0A0B4J272 114 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 HSPB6O14558 160 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 IGKV1D-33P01593 117 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 IGKV1-33P01594 117 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 OR8U8P0C7N1 319 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 IGHV4-30-4P0DP06 118 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 MYL12AP19105 171 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 NFYBP25208 207 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 GPR12P47775 334 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 PPP3R1P63098 170 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 PAX5Q02548 391 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 MED21Q13503 144 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 OR2G6Q5TZ20 316 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 TTC23Q5W5X9 447 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 XAF1Q6GPH4 301 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 OR9G1Q8NH87 305 aa12.32□□□□□ -0.44
DDX55-202ENST00000354291 RGP1Q92546 391 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms