RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 OR4F5Q8NH21 305 aa15.57■□□□□ 0.08
SYNE4-202ENST00000340477 KIRREL1Q96J84 757 aa15.57■□□□□ 0.08
SYNE4-202ENST00000340477 RAB18Q9NP72 206 aa15.57■□□□□ 0.08
SYNE4-202ENST00000340477 TRAPPC2LQ9UL33 140 aa15.57■□□□□ 0.08
SYNE4-202ENST00000340477 SSR3Q9UNL2 185 aa15.57■□□□□ 0.08
SYNE4-202ENST00000340477 AMMECR1Q9Y4X0 333 aaPredicted RBP15.57■□□□□ 0.08
SYNE4-202ENST00000340477 HAX1O00165 279 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 CD37P11049 281 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 RAB3BP20337 219 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 SSTR5P35346 364 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 RAG2P55895 527 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 LTC4SQ16873 150 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 PLA1AQ53H76 456 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 AWAT1Q58HT5 328 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 OR10K2Q6IF99 312 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 LIAT1Q6ZQX7 453 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 CCDC107Q8WV48 283 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 STEAP1Q9UHE8 339 aa15.56■□□□□ 0.08
SYNE4-202ENST00000340477 A0A087WXM4 84 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 A0A087X0M5 115 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 A0A1B0GUS0 222 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 A0A1B0GX30 115 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 UBE2QL1A1L167 161 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 TMEM14DPA8MWL7 114 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 LEUTXA8MZ59 168 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 SPINT2O43291 252 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 MT-ND4P03905 459 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 OR9G1Q8NH87 305 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 RFESDQ8TAC1 157 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 ARL11Q969Q4 196 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 FAM3DQ96BQ1 224 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 GFI1Q99684 422 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 TM2D1Q9BX74 207 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 KCNK15Q9H427 330 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 LINC00574Q9H8X3 128 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 BEX1Q9HBH7 125 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 ZNF286AQ9HBT8 521 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 KCNIP1Q9NZI2 227 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 DPM3Q9P2X0 92 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 HILPDAQ9Y5L2 63 aa15.55■□□□□ 0.08
SYNE4-202ENST00000340477 TRAV39A0A0B4J263 110 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 VGLL3A8MV65 326 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 NPIPB11E5RHQ5 1161 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 F2RL2O00254 374 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 ORC5O43913 435 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 NDUFA7O95182 113 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 CGB3P0DN86 165 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 CGB7P0DN87 165 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 FGF9P31371 208 aaPredicted RBP15.54■□□□□ 0.08
SYNE4-202ENST00000340477 GDNFP39905 211 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 UNC119Q13432 240 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 LY6EQ16553 131 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 TMEM30BQ3MIR4 351 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 SYT6Q5T7P8 510 aaPredicted RBP15.54■□□□□ 0.08
SYNE4-202ENST00000340477 HES5Q5TA89 166 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 SLC16A12Q6ZSM3 486 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 TSPAN14Q8NG11 270 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 OR51D1Q8NGF3 324 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 OR4P4Q8NGL7 312 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 AJUBAQ96IF1 538 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 PITPNC1Q9UKF7 332 aa15.54■□□□□ 0.08
SYNE4-202ENST00000340477 SDCBPO00560 298 aaPredicted RBP15.53■□□□□ 0.08
SYNE4-202ENST00000340477 CHATP28329 748 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 BLVRBP30043 206 aaPredicted RBP15.53■□□□□ 0.08
SYNE4-202ENST00000340477 CLDN12P56749 244 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 QRFPP83859 136 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 HLA-DRB5Q30154 266 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 CCDC144NLQ6NUI1 221 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 BAIAP2L2Q6UXY1 529 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 OR4K15Q8NH41 348 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 MMP28Q9H239 520 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 CHMP1AQ9HD42 196 aaPredicted RBP15.53■□□□□ 0.08
SYNE4-202ENST00000340477 PLEKHJ1Q9NW61 149 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 TXNL4BQ9NX01 149 aaKnown RBP15.53■□□□□ 0.08
SYNE4-202ENST00000340477 C1RLQ9NZP8 487 aa15.53■□□□□ 0.08
SYNE4-202ENST00000340477 IFITM5A6NNB3 132 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 IGLV1-47P01700 117 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 PAX6P26367 422 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 BRS3P32247 399 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 TIMM50Q3ZCQ8 353 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 SIGIRRQ6IA17 410 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 DTX3Q8N9I9 347 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 OR56B1Q8NGI3 324 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 OR52M1Q8NGK5 317 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 OR10X1Q8NGY0 326 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 KCTD7Q96MP8 289 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 NICN1Q9BSH3 213 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 FBLN5Q9UBX5 448 aa15.52■□□□□ 0.08
SYNE4-202ENST00000340477 LOC100506127A0A0U1RQW1 187 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 POM121CA8CG34 1229 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 OOSP1A8MZH6 123 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 BUB1B-PAK6H3BSN5 160 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 J3QR06 171 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 CD36P16671 472 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 MNDAP41218 407 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 GNG10P50151 68 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 DYNLT3P51808 116 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 OR10A3P58181 314 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 C2orf76Q3KRA6 126 aa15.51■□□□□ 0.07
SYNE4-202ENST00000340477 C6orf201Q7Z4U5 140 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms