RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 RAB39BQ96DA2 213 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 ATP5SQ99766 215 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 IER2Q9BTL4 223 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 NOSIPQ9Y314 301 aaKnown RBP7.44□□□□□ -1.22
CLK1-201ENST00000321356 KMT2EQ8IZD2 1858 aa7.44□□□□□ -1.22
CLK1-201ENST00000321356 TRAPPC2LH3BP13 241 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 SERPINA7P05543 415 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TDGF1P13385 188 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 OTX2P32243 289 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 CYB561P49447 251 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 ZNF154Q13106 437 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 ZNF324BQ6AW86 544 aaPredicted RBP7.43□□□□□ -1.22
CLK1-201ENST00000321356 MRPL21Q7Z2W9 205 aaKnown RBP7.43□□□□□ -1.22
CLK1-201ENST00000321356 OR5A2Q8NGI9 324 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 OR10G4Q8NGN3 311 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 CLDND2Q8NHS1 167 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TCTEX1D2Q8WW35 142 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 PSMF1Q92530 271 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 APOBEC3DQ96AK3 386 aaPredicted RBP7.43□□□□□ -1.22
CLK1-201ENST00000321356 RBMXL1Q96E39 390 aaKnown RBP7.43□□□□□ -1.22
CLK1-201ENST00000321356 PRRG4Q9BZD6 226 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 OR51M1Q9H341 326 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 PLK3Q9H4B4 646 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 NIT2Q9NQR4 276 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 LIPGQ9Y5X9 500 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 ZNF407Q9C0G0 2248 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 PIGBOS1A0A0B4J2F0 54 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 A0A0G2JRQ6 117 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 A0A1B0GU03 582 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 C5orf49A4QMS7 147 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 ZNF503-AS2A6NEH8 195 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 CXorf65A6NEN9 183 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 H0YL77 283 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TXNL1O43396 289 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 SYNGR1O43759 233 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 HLA-HP01893 362 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 HBE1P02100 147 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 LHX2P50458 406 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TLE4Q04727 773 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 KHDC3LQ587J8 217 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 AKR1C8PQ5T2L2 129 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 C20orf204Q6ZNR8 217 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 ZNF429Q86V71 674 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TMEM217Q8N7C4 229 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 CYB561D1Q8N8Q1 229 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 HLA-CQ95604 372 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 CABLES2Q9BTV7 478 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TMPRSS5Q9H3S3 457 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 OPA3Q9H6K4 179 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 ZNF552Q9H707 407 aaPredicted RBP7.43□□□□□ -1.22
CLK1-201ENST00000321356 OR2W1Q9Y3N9 320 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 WSB1Q9Y6I7 421 aa7.43□□□□□ -1.22
CLK1-201ENST00000321356 TMEM265A0A087WTH1 108 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 A0A096LPE4 126 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 TRAV24A0A0B4J272 114 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 LOC102723971A0A1B0GUV8 181 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 A0A1W2PPZ6 126 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 CD300LBA8K4G0 201 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 NPIPB11E5RHQ5 1161 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 WRBO00258 174 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 DFFBO76075 338 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 CCL2P13500 99 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 HOXA5P20719 270 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 ITGA3P26006 1051 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 FOXG1P55316 489 aaPredicted RBP7.42□□□□□ -1.22
CLK1-201ENST00000321356 CLDN18P56856 261 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 UBE2KP61086 200 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 DLK1P80370 383 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 ELOBQ15370 118 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 SLC35E3Q7Z769 313 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 STX12Q86Y82 276 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 LURAP1LQ8IV03 231 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 H1FOOQ8IZA3 346 aaPredicted RBP7.42□□□□□ -1.22
CLK1-201ENST00000321356 NEK7Q8TDX7 302 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 OR5P3Q8WZ94 311 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 GPR146Q96CH1 333 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 POM121L2Q96KW2 1035 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 RAB40CQ96S21 281 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 ZNF703Q9H7S9 590 aaPredicted RBP7.42□□□□□ -1.22
CLK1-201ENST00000321356 CALHM2Q9HA72 323 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 SIRT7Q9NRC8 400 aa7.42□□□□□ -1.22
CLK1-201ENST00000321356 BOKQ9UMX3 212 aaPredicted RBP7.42□□□□□ -1.22
CLK1-201ENST00000321356 ZNF727A8MUV8 499 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 HSPB6O14558 160 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 NGFP01138 241 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 FBP1P09467 338 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 CCNOP22674 350 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 S100PP25815 95 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 S100GP29377 79 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 TAGLN2P37802 199 aaKnown RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 HLA-DRB3P79483 266 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 KIAA0141Q14154 515 aaPredicted RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 SSPNQ14714 243 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 TIPARPQ7Z3E1 657 aaKnown RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 OR2M7Q8NG81 312 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 MAFAQ8NHW3 353 aaPredicted RBP7.41□□□□□ -1.22
CLK1-201ENST00000321356 Q8WTZ3 238 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 CT55Q8WUE5 264 aa7.41□□□□□ -1.22
CLK1-201ENST00000321356 LSM10Q969L4 123 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms