RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 NMSQ5H8A3 153 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 SP5Q6BEB4 398 aaPredicted RBP12.62□□□□□ -0.39
COL6A2-202ENST00000310645 LHFPL2Q6ZUX7 228 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 PLXDC1Q8IUK5 500 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 MYOTQ9UBF9 498 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
COL6A2-202ENST00000310645 B4GALT1P15291 398 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 EIF3IQ13347 325 aaKnown RBP12.61□□□□□ -0.39
COL6A2-202ENST00000310645 EXT1Q16394 746 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 C7orf61Q8IZ16 206 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 ADPRHL1Q8NDY3 354 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 RAB24Q969Q5 203 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 TAAR3PQ9P1P4 343 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 SLC22A20A6NK97 555 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 GALR1P47211 349 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 RBM11P57052 281 aaKnown RBP12.61□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF611Q8N823 705 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 UCK1Q9HA47 277 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 TMEM242Q9NWH2 141 aa12.61□□□□□ -0.39
COL6A2-202ENST00000310645 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF737O75373 536 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 CEACAM1P13688 526 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF16P17020 682 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 OTX1P32242 354 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 PAX5Q02548 391 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 TNFRSF9Q07011 255 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 C21orf62-AS1Q17RA5 79 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF468Q5VIY5 522 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 TMEM211Q6ICI0 200 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 FAM185AQ8N0U4 392 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 OR5L2Q8NGL0 311 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 OR1K1Q8NGR3 316 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 OR2V1Q8NHB1 315 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 LHX4Q969G2 390 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 SNHG12Q9BXW3 62 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 GPR27Q9NS67 375 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 SERPINE2P07093 398 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF25P17030 456 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF92Q03936 586 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 TMEM241Q24JQ0 296 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF501Q96CX3 271 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 TMEM68Q96MH6 324 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 DEFB126Q9BYW3 111 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ACTR3CQ9C0K3 210 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 VAX2Q9UIW0 290 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 C3orf80F5H4A9 247 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 HYAL1Q12794 435 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 SLC25A53Q5H9E4 307 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 C10orf35Q96D05 121 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 ALKBH3Q96Q83 286 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-202ENST00000310645 HS3ST6Q96QI5 342 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 IL36RNQ9UBH0 155 aa12.6□□□□□ -0.39
COL6A2-202ENST00000310645 DUX1O43812 170 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 ZFAND5O76080 213 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 TIAF1O95411 115 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 ZNF32P17041 273 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 CCNOP22674 350 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 SLC39A9Q9NUM3 307 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-202ENST00000310645 RNF115Q9Y4L5 304 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 LRRC3CA6NJW4 275 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 CNOT4O95628 575 aaKnown RBP12.59□□□□□ -0.39
COL6A2-202ENST00000310645 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
COL6A2-202ENST00000310645 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
COL6A2-202ENST00000310645 GNB2P62879 340 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 OR10G4Q8NGN3 311 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 OR1F12Q8NHA8 337 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 GALR2O43603 387 aaPredicted RBP12.59□□□□□ -0.39
COL6A2-202ENST00000310645 PFN1P07737 140 aaKnown RBP12.59□□□□□ -0.39
COL6A2-202ENST00000310645 COX5BP10606 129 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 NUBP1P53384 320 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 DPPA3Q6W0C5 159 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 IL1F10Q8WWZ1 152 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 CTDSP1Q9GZU7 261 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
COL6A2-202ENST00000310645 ATG2AQ2TAZ0 1938 aa12.58□□□□□ -0.39
COL6A2-202ENST00000310645 ETV2O00321 342 aaPredicted RBP12.58□□□□□ -0.4
COL6A2-202ENST00000310645 PSG2P11465 335 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 PAX1P15863 534 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 UCP1P25874 307 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 RPL29P47914 159 aaKnown RBP12.58□□□□□ -0.4
COL6A2-202ENST00000310645 C10orf128Q5T292 105 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 OR8G2PQ6IF36 304 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 TEX38Q6PEX7 206 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 Q6ZRM9 215 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 RNASEH2CQ8TDP1 164 aaKnown RBP12.58□□□□□ -0.4
COL6A2-202ENST00000310645 TMEM18Q96B42 140 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 RASL10BQ96S79 203 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 PSENENQ9NZ42 101 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 CACNG5Q9UF02 275 aa12.58□□□□□ -0.4
COL6A2-202ENST00000310645 TRAV1-1A0A0B4J248 108 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms