RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 S100A10P60903 97 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 BEX5Q5H9J7 111 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 LYZL2Q7Z4W2 148 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 CISD2Q8N5K1 135 aaKnown RBP16.39■□□□□ 0.21
HOXC4-201ENST00000303406 BVESQ8NE79 360 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 AKR1E2Q96JD6 320 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 TRAPPC2LQ9UL33 140 aa16.39■□□□□ 0.21
HOXC4-201ENST00000303406 hCG_1807616A0A1W2PRN6 198 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 H0Y980 276 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 TMPRSS3P57727 454 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 EIF5AP63241 154 aaKnown RBP16.38■□□□□ 0.21
HOXC4-201ENST00000303406 PRAMEF6Q5VXH4 476 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 GFRALQ6UXV0 394 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 LRRC20Q8TCA0 184 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 ABHD14BQ96IU4 210 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 SPIN2AQ99865 258 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 SPIN2BQ9BPZ2 258 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 PLEKHA2Q9HB19 425 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 MSL2Q9HCI7 577 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 CYTL1Q9NRR1 136 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 FZR1Q9UM11 496 aa16.38■□□□□ 0.21
HOXC4-201ENST00000303406 URB1O60287 2271 aaKnown RBP16.38■□□□□ 0.21
HOXC4-201ENST00000303406 SHANK1Q9Y566 2161 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 E5RGE8 158 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 KLF3P57682 345 aaPredicted RBP16.37■□□□□ 0.21
HOXC4-201ENST00000303406 ZNF826PQ6ZT77 177 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 C5orf24Q7Z6I8 188 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 OR10V1Q8NGI7 309 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 ANGPTL6Q8NI99 470 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 LHFPL5Q8TAF8 219 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 TOLLIPQ9H0E2 274 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 CCL28Q9NRJ3 127 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 JKAMPQ9P055 326 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 PFDN2Q9UHV9 154 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 NSG2Q9Y328 171 aa16.37■□□□□ 0.21
HOXC4-201ENST00000303406 UBE2J1Q9Y385 318 aaPredicted RBP16.37■□□□□ 0.21
HOXC4-201ENST00000303406 A0A0G2JNJ9 132 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 CLEC18AA5D8T8 446 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 MSGN1A6NI15 193 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 C3orf80F5H4A9 247 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 HKR1P10072 659 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 SNTB1Q13884 538 aaKnown RBP16.36■□□□□ 0.21
HOXC4-201ENST00000303406 AANATQ16613 207 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 MSMPQ1L6U9 139 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 TMEM268Q5VZI3 342 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 CLEC18CQ8NCF0 446 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 OR5D13Q8NGL4 314 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 PCNPQ8WW12 178 aaKnown RBP16.36■□□□□ 0.21
HOXC4-201ENST00000303406 KCNIP1Q9NZI2 227 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 Q9UFV3 132 aa16.36■□□□□ 0.21
HOXC4-201ENST00000303406 PGLYRP1O75594 196 aaPredicted RBP16.35■□□□□ 0.21
HOXC4-201ENST00000303406 HEXAP06865 529 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 RBPJQ06330 500 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 BAP18Q8IXM2 172 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 SELENOHQ8IZQ5 122 aaKnown RBP16.35■□□□□ 0.21
HOXC4-201ENST00000303406 SLC35G3Q8N808 338 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 NUP37Q8NFH4 326 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 OR4D5Q8NGN0 318 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 TMEM171Q8WVE6 324 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 OR14J1Q9UGF5 321 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 MFSD2BA6NFX1 497 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 OOEPA6NGQ2 149 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 SRRM5B3KS81 715 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 K7EPK0 472 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 HSD17B6O14756 317 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 WNT9BO14905 357 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 PSPNO60542 156 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 MBPP02686 304 aaPredicted RBP16.35■□□□□ 0.21
HOXC4-201ENST00000303406 BMP5P22003 454 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 FAM27E3Q08E93 113 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 TESK1Q15569 626 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 MSMO1Q15800 293 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 ZNF695Q8IW36 515 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 FAM71E2Q8N5Q1 922 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 EIF4E3Q8N5X7 224 aaKnown RBP16.35■□□□□ 0.21
HOXC4-201ENST00000303406 OR2Z1Q8NG97 314 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 LRRC29Q8WV35 223 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 REG4Q9BYZ8 158 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 DNTTIP1Q9H147 329 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 TAF9BQ9HBM6 251 aa16.35■□□□□ 0.21
HOXC4-201ENST00000303406 ERRFI1Q9UJM3 462 aaPredicted RBP16.35■□□□□ 0.21
HOXC4-201ENST00000303406 C16orf97H3BN30 126 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 ST8SIA3O43173 380 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 F2RP25116 425 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 CD40P25942 277 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 RPL12P30050 165 aaKnown RBP16.34■□□□□ 0.21
HOXC4-201ENST00000303406 CCKARP32238 428 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 GATA4P43694 442 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 SELENOVP59797 346 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 TOR2AQ5JU69 321 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 TRAT1Q6PIZ9 186 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 MEX3BQ6ZN04 569 aaKnown RBP16.34■□□□□ 0.21
HOXC4-201ENST00000303406 HSD17B13Q7Z5P4 300 aaPredicted RBP16.34■□□□□ 0.21
HOXC4-201ENST00000303406 RBPMSQ93062 196 aaKnown RBP16.34■□□□□ 0.21
HOXC4-201ENST00000303406 CXorf58Q96LI9 332 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 OR1A1Q9P1Q5 309 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 DUSP13Q9UII6 198 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 POMT1Q9Y6A1 747 aa16.34■□□□□ 0.21
HOXC4-201ENST00000303406 ZSCAN5BA6NJL1 495 aa16.33■□□□□ 0.2
HOXC4-201ENST00000303406 GAPDHP04406 335 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms