RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CFHR1Q03591 330 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 TNFRSF9Q07011 255 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 WDR5BQ86VZ2 330 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 OR4F5Q8NH21 305 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 GATAD1Q8WUU5 269 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 OR4F4Q96R69 305 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 UCK1Q9HA47 277 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 ADAMTS9Q9P2N4 1935 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 TMEM131Q92545 1883 aa12.62□□□□□ -0.39
COL6A2-201ENST00000300527 DVL1O14640 695 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 MBP02144 154 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 CELA2AP08217 269 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 MRPS21P82921 87 aaKnown RBP12.61□□□□□ -0.39
COL6A2-201ENST00000300527 BSXQ3C1V8 233 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 CACNG5Q9UF02 275 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 AQP7P3A6NL99 342 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 HS3ST1O14792 307 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 CA11O75493 328 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 VDAC1P21796 283 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 CD38P28907 300 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 RDH5Q92781 318 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 TMEM68Q96MH6 324 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 KCNS2Q9ULS6 477 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF816-ZNF321PA0A0X1KG74 233 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 COX5BP10606 129 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF32P17041 273 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 HNF1AP20823 631 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 SUMO3P55854 103 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-201ENST00000300527 GNB2P62879 340 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 PNRC1Q12796 327 aaPredicted RBP12.61□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF726P1Q15940 193 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 OR2M3Q8NG83 312 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 IL22RA2Q969J5 263 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 HS3ST6Q96QI5 342 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 MMP17Q9ULZ9 603 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 PPP1R3CQ9UQK1 317 aa12.61□□□□□ -0.39
COL6A2-201ENST00000300527 EPOPA6NHQ4 379 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 TNFSF11O14788 317 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 PSG2P11465 335 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 CCL2P13500 99 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF92Q03936 586 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 IL24Q13007 206 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 TEX38Q6PEX7 206 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 GPR146Q96CH1 333 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 PSENENQ9NZ42 101 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 MTCH2Q9Y6C9 303 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 IGHV3-64DA0A0J9YX35 117 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 TIAF1O95411 115 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 CHD3Q12873 2000 aaKnown RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 BTNL3Q6UXE8 466 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 PLXDC1Q8IUK5 500 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 H1FOOQ8IZA3 346 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 TMEM18Q96B42 140 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 SIGLEC12Q96PQ1 595 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 NEU1Q99519 415 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 SPOCK3Q9BQ16 436 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 OR51B6Q9H340 312 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 DOCK11Q5JSL3 2073 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 IGHV1OR21-1A0A087WYE8 117 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 SLC22A20A6NK97 555 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 CD300LBA8K4G0 201 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 DUX1O43812 170 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 IFNA1P01562 189 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 ZFP36L1Q07352 338 aaKnown RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 EXT1Q16394 746 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 LHFPL2Q6ZUX7 228 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 MTIF3Q9H2K0 278 aaKnown RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 SRD5A3Q9H8P0 318 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 CISD1Q9NZ45 108 aaKnown RBP12.6□□□□□ -0.39
COL6A2-201ENST00000300527 MYOTQ9UBF9 498 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 VAX2Q9UIW0 290 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 R4GN57 208 aa12.6□□□□□ -0.39
COL6A2-201ENST00000300527 PAX9P55771 341 aa12.59□□□□□ -0.39
COL6A2-201ENST00000300527 RBM11P57052 281 aaKnown RBP12.59□□□□□ -0.39
COL6A2-201ENST00000300527 MKRN2OSH3BPM6 223 aa12.59□□□□□ -0.39
COL6A2-201ENST00000300527 IL18BPO95998 194 aa12.59□□□□□ -0.39
COL6A2-201ENST00000300527 BCL3P20749 454 aa12.59□□□□□ -0.39
COL6A2-201ENST00000300527 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
COL6A2-201ENST00000300527 RBM14Q96PK6 669 aaKnown RBP12.59□□□□□ -0.39
COL6A2-201ENST00000300527 TAAR3PQ9P1P4 343 aa12.59□□□□□ -0.39
COL6A2-201ENST00000300527 ZFAND5O76080 213 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 CD81P60033 236 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 BAXQ07812 192 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 OR8G5Q8NG78 346 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 OR5L2Q8NGL0 311 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 SDSLQ96GA7 329 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 ZNF488Q96MN9 340 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 CFHR5Q9BXR6 569 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 OR51I2Q9H344 312 aa12.58□□□□□ -0.39
COL6A2-201ENST00000300527 ERRFI1Q9UJM3 462 aaPredicted RBP12.58□□□□□ -0.39
COL6A2-201ENST00000300527 TRBV24-1A0A075B6N3 115 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 M0R143 59 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 RND2P52198 227 aa12.58□□□□□ -0.4
COL6A2-201ENST00000300527 NUBP1P53384 320 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms