RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 J3QT63 122 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 DEGS1O15121 323 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 IL18BPO95998 194 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 GLI4P10075 376 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 PRKACAP17612 351 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 MDH2P40926 338 aaKnown RBP21.36■■□□□ 1.01
ROM1-201ENST00000278833 OR8G1Q15617 311 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 H1FOOQ8IZA3 346 aaPredicted RBP21.36■■□□□ 1.01
ROM1-201ENST00000278833 HIPK2Q9H2X6 1198 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 OR51I2Q9H344 312 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 PLA2G3Q9NZ20 509 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 ZNF175Q9Y473 711 aa21.36■■□□□ 1.01
ROM1-201ENST00000278833 IGSF23A1L1A6 192 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 TSC22D1Q15714 1073 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 SPIN3Q5JUX0 258 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 ZNF324BQ6AW86 544 aaPredicted RBP21.35■■□□□ 1.01
ROM1-201ENST00000278833 CLEC9AQ6UXN8 241 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 FAM58AQ8N1B3 248 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 PLPPR1Q8TBJ4 325 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 TRAV24A0A0B4J272 114 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 AGPAT2O15120 278 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 S100GP29377 79 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 LINC00696Q6ZRV3 163 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 BATF2Q8N1L9 274 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 C15orf54Q8N8G6 183 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 PBDC1Q9BVG4 233 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 TUBA4BQ9H853 241 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 MSRB2Q9Y3D2 182 aa21.35■■□□□ 1.01
ROM1-201ENST00000278833 ADAM20O43506 726 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 SLC10A1Q14973 349 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 AVPI1Q5T686 147 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 FBXW9Q5XUX1 488 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 TMEM252Q8N6L7 170 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 NEK7Q8TDX7 302 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 PRSS50Q9UI38 385 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 OR2W1Q9Y3N9 320 aa21.34■■□□□ 1.01
ROM1-201ENST00000278833 Q8IYB0 196 aa21.33■■□□□ 1.01
ROM1-201ENST00000278833 WDYHV1Q96HA8 205 aa21.33■■□□□ 1.01
ROM1-201ENST00000278833 SH3BGRL3Q9H299 93 aa21.33■■□□□ 1.01
ROM1-201ENST00000278833 CCL28Q9NRJ3 127 aa21.33■■□□□ 1.01
ROM1-201ENST00000278833 MEX3AA1L020 520 aaKnown RBP21.32■■□□□ 1
ROM1-201ENST00000278833 BTBD17A6NE02 478 aa21.32■■□□□ 1
ROM1-201ENST00000278833 FAM24AA6NFZ4 105 aa21.32■■□□□ 1
ROM1-201ENST00000278833 PGLYRP1O75594 196 aaPredicted RBP21.32■■□□□ 1
ROM1-201ENST00000278833 CD46P15529 392 aa21.32■■□□□ 1
ROM1-201ENST00000278833 RAB13P51153 203 aa21.32■■□□□ 1
ROM1-201ENST00000278833 POLR2GP62487 172 aaKnown RBP eCLIP21.32■■□□□ 1
ROM1-201ENST00000278833 ZNF616Q08AN1 781 aa21.32■■□□□ 1
ROM1-201ENST00000278833 AKR1E2Q96JD6 320 aa21.32■■□□□ 1
ROM1-201ENST00000278833 COLCA2A8K830 154 aa21.32■■□□□ 1
ROM1-201ENST00000278833 F2RP25116 425 aa21.32■■□□□ 1
ROM1-201ENST00000278833 NFYBP25208 207 aa21.32■■□□□ 1
ROM1-201ENST00000278833 HOXA1P49639 335 aaPredicted RBP21.32■■□□□ 1
ROM1-201ENST00000278833 Q6P435 159 aa21.32■■□□□ 1
ROM1-201ENST00000278833 LINC00518Q8N0U6 118 aa21.32■■□□□ 1
ROM1-201ENST00000278833 LIPGQ9Y5X9 500 aa21.32■■□□□ 1
ROM1-201ENST00000278833 VAMP2P63027 116 aa21.31■■□□□ 1
ROM1-201ENST00000278833 SP5Q6BEB4 398 aaPredicted RBP21.31■■□□□ 1
ROM1-201ENST00000278833 HSD17B11Q8NBQ5 300 aa21.31■■□□□ 1
ROM1-201ENST00000278833 RXFP4Q8TDU9 374 aa21.31■■□□□ 1
ROM1-201ENST00000278833 HSPA12AO43301 675 aa21.3■■□□□ 1
ROM1-201ENST00000278833 PPT1P50897 306 aa21.3■■□□□ 1
ROM1-201ENST00000278833 SOX8P57073 446 aa21.3■■□□□ 1
ROM1-201ENST00000278833 ODF3L1Q8IXM7 274 aa21.3■■□□□ 1
ROM1-201ENST00000278833 GNPNAT1Q96EK6 184 aaPredicted RBP21.3■■□□□ 1
ROM1-201ENST00000278833 RTL8AQ9BWD3 113 aa21.3■■□□□ 1
ROM1-201ENST00000278833 ZDHHC11Q9H8X9 412 aa21.3■■□□□ 1
ROM1-201ENST00000278833 IL17BQ9UHF5 180 aa21.3■■□□□ 1
ROM1-201ENST00000278833 RNF115Q9Y4L5 304 aa21.3■■□□□ 1
ROM1-201ENST00000278833 CNTRLQ7Z7A1 2325 aa21.3■■□□□ 1
ROM1-201ENST00000278833 A0A1B0GU03 582 aa21.3■■□□□ 1
ROM1-201ENST00000278833 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP21.3■■□□□ 1
ROM1-201ENST00000278833 TNFSF15O95150 251 aa21.3■■□□□ 1
ROM1-201ENST00000278833 PRH1P02810 166 aa21.3■■□□□ 1
ROM1-201ENST00000278833 ATP6V0CP27449 155 aa21.3■■□□□ 1
ROM1-201ENST00000278833 RTP5Q14D33 572 aa21.3■■□□□ 1
ROM1-201ENST00000278833 C20orf204Q6ZNR8 217 aa21.3■■□□□ 1
ROM1-201ENST00000278833 MDP1Q86V88 176 aa21.3■■□□□ 1
ROM1-201ENST00000278833 BIN3Q9NQY0 253 aa21.3■■□□□ 1
ROM1-201ENST00000278833 CHD8Q9HCK8 2581 aa21.3■■□□□ 1
ROM1-201ENST00000278833 HSD17B6O14756 317 aa21.29■■□□□ 1
ROM1-201ENST00000278833 SSSCA1O60232 199 aa21.29■■□□□ 1
ROM1-201ENST00000278833 LILRA1O75019 489 aa21.29■■□□□ 1
ROM1-201ENST00000278833 ERVK11-1P61568 191 aa21.29■■□□□ 1
ROM1-201ENST00000278833 TBC1D28Q2M2D7 210 aa21.29■■□□□ 1
ROM1-201ENST00000278833 RNF212Q495C1 297 aa21.29■■□□□ 1
ROM1-201ENST00000278833 HIKESHIQ53FT3 197 aa21.29■■□□□ 1
ROM1-201ENST00000278833 CXorf66Q5JRM2 361 aaPredicted RBP21.29■■□□□ 1
ROM1-201ENST00000278833 DPPA3Q6W0C5 159 aa21.29■■□□□ 1
ROM1-201ENST00000278833 OR10J5Q8NHC4 309 aa21.29■■□□□ 1
ROM1-201ENST00000278833 C3AR1Q16581 482 aa21.28■■□□□ 1
ROM1-201ENST00000278833 TMEM182Q6ZP80 229 aaPredicted RBP21.28■■□□□ 1
ROM1-201ENST00000278833 TMEM171Q8WVE6 324 aa21.28■■□□□ 1
ROM1-201ENST00000278833 LSM10Q969L4 123 aaKnown RBP21.28■■□□□ 1
ROM1-201ENST00000278833 SLC35B3Q9H1N7 401 aa21.28■■□□□ 1
ROM1-201ENST00000278833 GLRX2Q9NS18 164 aa21.28■■□□□ 1
ROM1-201ENST00000278833 TAAR3PQ9P1P4 343 aa21.28■■□□□ 1
ROM1-201ENST00000278833 POLDIP2Q9Y2S7 368 aa21.28■■□□□ 1
ROM1-201ENST00000278833 AHCTF1Q8WYP5 2266 aa21.28■■□□□ 1
ROM1-201ENST00000278833 CRYBA1P05813 215 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms