RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KLHL13Q9P2N7 655 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 WISP1O95388 367 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 TMEM50AO95807 157 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 HBE1P02100 147 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 IL3RAP26951 378 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 DUSP1P28562 367 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 EFNA3P52797 238 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 UBE2G2P60604 165 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 ZNF154Q13106 437 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 GNMTQ14749 295 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 FAM180AQ6UWF9 173 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 H1FOOQ8IZA3 346 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 D2HGDHQ8N465 521 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 TMEM252Q8N6L7 170 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 VSTM2LQ96N03 204 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 OR6C1Q96RD1 312 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 OR10A5Q9H207 317 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 PHF3Q92576 2039 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 HYPMO75409 117 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 VAMP5O95183 116 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 ISG15P05161 165 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 CD27P26842 260 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 CTRLP40313 264 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 FASLGP48023 281 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 CADM4Q8NFZ8 388 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 OR5T1Q8NG75 326 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 OR4D5Q8NGN0 318 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 RTN4IP1Q8WWV3 396 aaPredicted RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 WFDC12Q8WWY7 111 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 C18orf12Q96KH6 178 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 NUDT16L1Q9BRJ7 211 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 PATZ1Q9HBE1 687 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 PRTFDC1Q9NRG1 225 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 NAT8Q9UHE5 227 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 MCTS1Q9ULC4 181 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 SLC45A2Q9UMX9 530 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 IGLV1-36A0A0B4J1U3 117 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 F2Z2F3 143 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 FXYD4P59646 89 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 CBLN3Q6UW01 205 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 WFDC8Q8IUA0 241 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 CISD2Q8N5K1 135 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 DYRK2Q92630 601 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 ZNF845Q96IR2 970 aaPredicted RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 TXN2Q99757 166 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 NAA60Q9H7X0 242 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 NXT1Q9UKK6 140 aaKnown RBP13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 TRAPPC1Q9Y5R8 145 aa13.57□□□□□ -0.24
CTDSP1-201ENST00000273062 WDFY3Q8IZQ1 3526 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 MRPL49Q13405 166 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 MEX3BQ6ZN04 569 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 C16orf52Q8NHV5 167 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 MSI2Q96DH6 328 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 RSG1Q9BU20 258 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 OR51I2Q9H344 312 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 CENPMQ9NSP4 180 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 NKX2-6A6NCS4 301 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 SH2D1BO14796 132 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 UBE2NP61088 152 aaKnown RBP13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 PRDX4Q13162 271 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 EXT1Q16394 746 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 CYP2G1PQ6ZSU1 146 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 C1QL2Q7Z5L3 287 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 CENPVQ7Z7K6 275 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 MCEMP1Q8IX19 187 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 Q8N976 141 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 IMMP2LQ96T52 175 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 WIPI2Q9Y4P8 454 aa13.56□□□□□ -0.24
CTDSP1-201ENST00000273062 CFAP54Q96N23 3096 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 PRSS37A4D1T9 235 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 AQP7P3A6NL99 342 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 C17orf51A8MQB3 221 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 GOSR1O95249 250 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 TTRP02766 147 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 CT45A8P0DMV1 189 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 CT45A9P0DMV2 189 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 PSG1P11464 419 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 HNRNPA3P51991 378 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 TMEM41BQ5BJD5 291 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 CT45A2Q5DJT8 189 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 ATG4DQ86TL0 474 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 DGAT2Q96PD7 388 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 FBXL7Q9UJT9 491 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 ST3GAL6Q9Y274 331 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 COA3Q9Y2R0 106 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 SMPD2O60906 423 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 SERF1AO75920 110 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 TYMSP04818 313 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 ADMP35318 185 aa13.55□□□□□ -0.24
CTDSP1-201ENST00000273062 OR1D4P47884 311 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms