RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CD276Q5ZPR3 534 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 BAIAP2L2Q6UXY1 529 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 BTN2A1Q7KYR7 527 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 CCDC190Q86UF4 302 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 C8orf46Q8TAG6 207 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 SOSTQ9BQB4 213 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 DCTN5Q9BTE1 182 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 YAE1D1Q9NRH1 226 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 RABL2AQ9UBK7 228 aaPredicted RBP16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 RABL2BQ9UNT1 228 aa16.4■□□□□ 0.22
PDLIM2-221ENST00000622702 SETD2Q9BYW2 2564 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 TMEM235A6NFC5 223 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 NAPSAO96009 420 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 MT-ND4P03905 459 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 GLIPR1P48060 266 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 MEF2CQ06413 473 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 H1FXQ92522 213 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 DYRK2Q92630 601 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 CMSS1Q9BQ75 279 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 RIMS4Q9H426 269 aaPredicted RBP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 LPAR3Q9UBY5 353 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 KIF25Q9UIL4 384 aa16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 MRPS7Q9Y2R9 242 aaKnown RBP16.39■□□□□ 0.21
PDLIM2-221ENST00000622702 NF1P21359 2839 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 LOC105371242A0A075B767 164 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 ODAMA1E959 279 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 POM121CA8CG34 1229 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 C22orf46C9J442 243 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 ETV6P41212 452 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 RPL31P62899 125 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 PITPNAQ00169 270 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 TPRX1Q8N7U7 411 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 C15orf40Q8WUR7 153 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 DACT3Q96B18 629 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 DMRTB1Q96MA1 342 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 C12orf4Q9NQ89 552 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 C19orf12Q9NSK7 152 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 RPUSD1Q9UJJ7 312 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 ELF5Q9UKW6 265 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 DSCAML1Q8TD84 2053 aa16.38■□□□□ 0.21
PDLIM2-221ENST00000622702 TRBV6-6A0A0A6YYG2 114 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 B4DSR2 109 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 TGFAP01135 160 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 CD3GP09693 182 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 LCN2P80188 198 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 PAX2Q02962 417 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 ARFRP1Q13795 201 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 PYHIN1Q6K0P9 492 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 LINC01356Q8N9X3 169 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 LY6G5BQ8NDX9 201 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 MRPL30Q8TCC3 161 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 ING3Q9NXR8 418 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 OR6C3Q9NZP0 311 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 HIVEP2P31629 2446 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 ARHGAP32A7KAX9 2087 aa16.37■□□□□ 0.21
PDLIM2-221ENST00000622702 ZFHX3Q15911 3703 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 KIAA2026Q5HYC2 2103 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 MEIKINA0A087WXM9 373 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 PPIAL4CA0A0B4J2A2 164 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 hADV38S2A0JD32 116 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 FABP12A6NFH5 140 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 GNG2P59768 71 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 MRPS15P82914 257 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 SPANXN2Q5MJ10 180 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 ABHD1Q96SE0 405 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 HDHD3Q9BSH5 251 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 LINC00312Q9Y6C7 94 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 V9GYH0 126 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 WNK2Q9Y3S1 2297 aa16.36■□□□□ 0.21
PDLIM2-221ENST00000622702 A0A0G2JMP0 313 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 A0A0X1KG70 313 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 A8MV72 311 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 INAFM1C9JVW0 142 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 MSMBP08118 114 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 PTHLHP12272 177 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 PTBP1P26599 531 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 MADCAM1Q13477 382 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 IL18Q14116 193 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 CR1LQ2VPA4 569 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 TMEM200BQ69YZ2 307 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 ZNF880Q6PDB4 577 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 TCF23Q7RTU1 214 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 SNX29P2Q8IUI4 249 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 OR4M2Q8NGB6 313 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 NUDCD2Q8WVJ2 157 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 CORO2AQ92828 525 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 LPAR2Q9HBW0 351 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 MBNL3Q9NUK0 354 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 TRGV10A0A0A0MS01 117 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 ENSAO43768 121 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 SSX5O60225 188 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 DTYMKP23919 212 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 PRSS3P35030 304 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 FAM131AQ6UXB0 335 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 Q6ZPA2 131 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 MOB1BQ7L9L4 216 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 FAM185AQ8N0U4 392 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 ZNF565Q8N9K5 539 aa16.35■□□□□ 0.21
PDLIM2-221ENST00000622702 OR4K15Q8NH41 348 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms