RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 BCL2L10Q9HD36 194 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 XIRP1Q702N8 1843 aaKnown RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 DYSFO75923 2080 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 KLK8O60259 260 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 VSIG10L2P0DP72 767 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 HIST1H1EP10412 219 aaKnown RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 RELQ04864 619 aaPredicted RBP7.72□□□□□ -1.17
CSMD1-216ENST00000602557 TCTN1Q2MV58 587 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 CALHM1Q8IU99 346 aa7.72□□□□□ -1.17
CSMD1-216ENST00000602557 FUT7Q11130 342 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 SAPCD1Q5SSQ6 148 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 KISS1RQ969F8 398 aaPredicted RBP7.71□□□□□ -1.17
CSMD1-216ENST00000602557 RCC2Q9P258 522 aaKnown RBP7.71□□□□□ -1.17
CSMD1-216ENST00000602557 KCNE3Q9Y6H6 103 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 LRRC3CA6NJW4 275 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 CORTO00230 105 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 NTN1O95631 604 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 FAM3BP58499 235 aaPredicted RBP7.71□□□□□ -1.17
CSMD1-216ENST00000602557 FMODQ06828 376 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 PABPC1L2AQ5JQF8 200 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 ZNF506Q5JVG8 444 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 RNF133Q8WVZ7 376 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 EDARADDQ8WWZ3 215 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 CNRIP1Q96F85 164 aaPredicted RBP7.71□□□□□ -1.17
CSMD1-216ENST00000602557 DERL1Q9BUN8 251 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 HES7Q9BYE0 225 aa7.71□□□□□ -1.17
CSMD1-216ENST00000602557 SHISA7A6NL88 538 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 CYC1P08574 325 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 APOBEC3DQ96AK3 386 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-216ENST00000602557 GAL3ST2Q9H3Q3 398 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 PARP11Q9NR21 331 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 NEU3Q9UQ49 428 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 RBP4P02753 201 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 OR2Z1Q8NG97 314 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 POM121L2Q96KW2 1035 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 PTPRDP23468 1912 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 NUFIP2Q7Z417 695 aaKnown RBP7.71□□□□□ -1.18
CSMD1-216ENST00000602557 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 FIGNL2A6NMB9 653 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 FUT6P51993 359 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 ARRDC1Q8N5I2 433 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 CLDN23Q96B33 292 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 MISP3Q96FF7 219 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 ZFPL1O95159 310 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 MT-CO3P00414 261 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 MNX1P50219 401 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-216ENST00000602557 TNFRSF9Q07011 255 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 RGS7BPQ6MZT1 257 aaPredicted RBP7.71□□□□□ -1.18
CSMD1-216ENST00000602557 OTOSQ8NHW6 89 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 PELI1Q96FA3 418 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 AAMDCQ9H7C9 122 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 VAX2Q9UIW0 290 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 OR3A4PP47883 348 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 MSRB3Q8IXL7 192 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 SPG11Q96JI7 2443 aa7.71□□□□□ -1.18
CSMD1-216ENST00000602557 H0YL77 283 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 BMI1P35226 326 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 MPLP40238 635 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 RHOBP62745 196 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 IL13RA2Q14627 380 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 OR1K1Q8NGR3 316 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 CES1P1Q9UKY3 287 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 CEACAM16Q2WEN9 425 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 WDR38Q5JTN6 314 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 A0A087WUJ7 227 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 A0A0B4J2E0 115 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 A0A1B0GX12 115 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 TMEM30CPA0ZSE6 113 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 HPP00738 406 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 MELTFP08582 738 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 RHBDD2Q6NTF9 364 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 Q6ZNB5 142 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 MOB3BQ86TA1 216 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 RAB40CQ96S21 281 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 SLC17A5Q9NRA2 495 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 P4HTMQ9NXG6 502 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 H3BMH7 237 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 ZNF841Q6ZN19 808 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 IP6K3Q96PC2 410 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 MRPL37Q9BZE1 423 aaKnown RBP7.7□□□□□ -1.18
CSMD1-216ENST00000602557 UBR3Q6ZT12 1888 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 TRBV5-4A0A0C4DH59 114 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 M0R3E3 92 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 PAGE4O60829 102 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 PAFAH1B2P68402 229 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 CST9Q5W186 159 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 LURAP1LQ8IV03 231 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 ZFP64Q9NPA5 681 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 HDGFL3Q9Y3E1 203 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.7□□□□□ -1.18
CSMD1-216ENST00000602557 MEX3AA1L020 520 aaKnown RBP7.7□□□□□ -1.18
CSMD1-216ENST00000602557 ACTL6AO96019 429 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 LPAR6P43657 344 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 IZUMO4Q1ZYL8 232 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 PLPPR5Q32ZL2 321 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 ICAM5Q9UMF0 924 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 PAPPA2Q9BXP8 1791 aa7.7□□□□□ -1.18
CSMD1-216ENST00000602557 C1QL1O75973 258 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms