RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CCL17Q92583 94 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPTSSAQ969W0 71 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 NRBF2Q96F24 287 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF799Q96GE5 643 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 C1orf147Q96MC9 270 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2V2Q96R30 315 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 PITX2Q99697 317 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 THTPAQ9BU02 230 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CHID1Q9BWS9 393 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 TSSK6Q9BXA6 273 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 HCAR1Q9BXC0 346 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 RERGLQ9H628 205 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 YY1AP1Q9H869 796 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SP140LQ9H930 580 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 PLEKHA3Q9HB20 300 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 PATZ1Q9HBE1 687 aaKnown RBP2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM165Q9HC07 324 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CMC2Q9NRP2 79 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM100Q9NV29 134 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 VNN3Q9NY84 501 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 TREM2Q9NZC2 230 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 THYN1Q9P016 225 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 POLR1DQ9Y2S0 133 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SAMHD1Q9Y3Z3 626 aaKnown RBP2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CACNG2Q9Y698 323 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 COMMD3-BMI1R4GMX3 469 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 NBEAL1Q6ZS30 2694 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 DHRS12A0PJE2 317 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 LRRC30A6NM36 301 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 RIIAD1A6NNX1 92 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SRRM4A7MD48 611 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 CD300LBA8K4G0 201 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 F5H5K5 113 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF593O00488 134 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 GYG2O15488 501 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 TXNL1O43396 289 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NDUFA2O43678 99 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 GMDSO60547 372 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ATP5HO75947 161 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 GLCEO94923 617 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 HMGN1P05114 100 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ANXA8P13928 327 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 GP9P14770 177 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SPI1P17947 270 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 CFL1P23528 166 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ACKR3P25106 362 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 PYCR1P32322 319 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 CFHR2P36980 270 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SRP14P37108 136 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ERFP50548 548 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 GRB2P62993 217 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 PAX2Q02962 417 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF92Q03936 586 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 PPP1R8Q12972 351 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 BNIP1Q12981 228 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 MAB21L1Q13394 359 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 FLOT2Q14254 428 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZMYND11Q15326 602 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SNCBQ16143 134 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF404Q494X3 552 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 CLEC12AQ5QGZ9 265 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 AVPI1Q5T686 147 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 OTPQ5XKR4 325 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR2T2Q6IF00 324 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 DEGS2Q6QHC5 323 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SIGLEC15Q6ZMC9 328 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 Q6ZR54 194 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 PGAP1Q75T13 922 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 MRPL21Q7Z2W9 205 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 DCXRQ7Z4W1 244 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 CEACAM19Q7Z692 300 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 TMEM179BQ7Z7N9 219 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NAA40Q86UY6 237 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 PARP8Q8N3A8 854 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 FGFRL1Q8N441 504 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 LINC00612Q8N6U2 182 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 CYB561A3Q8NBI2 242 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 DEFB108BQ8NET1 73 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 PROKR2Q8NFJ6 384 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR2Z1Q8NG97 314 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR10G2Q8NGC3 310 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 OR52H1Q8NGJ2 320 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 C8orf46Q8TAG6 207 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NANPQ8TBE9 248 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 TEX47Q8TBZ9 253 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 ZNF418Q8TF45 676 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 RNF133Q8WVZ7 376 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 RFT1Q96AA3 541 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLCO4A1Q96BD0 722 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 SLAMF6Q96DU3 332 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 DUS3LQ96G46 650 aaKnown RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 GAL3ST1Q99999 423 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NIPSNAP1Q9BPW8 284 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 MMADHCQ9H3L0 296 aaPredicted RBP2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 RGCCQ9H4X1 137 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NARFLQ9H6Q4 476 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NIPAL2Q9H841 368 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 WDR76Q9H967 626 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 RNPEPL1Q9HAU8 725 aa2.77□□□□□ -1.97
CKS1BP3-201ENST00000600888 NTN4Q9HB63 628 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms