RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 SRSF7Q16629 238 aaKnown RBP eCLIP3.9□□□□□ -1.79
NUP85-213ENST00000579838 TBR1Q16650 682 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 FAM76BQ5HYJ3 339 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 ALKBH2Q6NS38 261 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 WDR82Q6UXN9 313 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 MEX3BQ6ZN04 569 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 ZNF497Q6ZNH5 498 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 TBC1D26Q86UD7 250 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 ZNF573Q86YE8 665 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 SGPP2Q8IWX5 399 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 H1FOOQ8IZA3 346 aaPredicted RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 SLC38A6Q8IZM9 456 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 SELENOHQ8IZQ5 122 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 ZNF295-AS1Q8N0V1 137 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 GAPTQ8N292 157 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 STPG2Q8N412 459 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 FAM71E2Q8N5Q1 922 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 SLC35G3Q8N808 338 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 LRTM2Q8N967 370 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 BOLLQ8N9W6 283 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 DMBX1Q8NFW5 382 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 OR8G5Q8NG78 346 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 OR5T2Q8NGG2 359 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 OR4D5Q8NGN0 318 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 FAM57AQ8TBR7 257 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 NEK7Q8TDX7 302 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 SECTM1Q8WVN6 248 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 RTN4IP1Q8WWV3 396 aaPredicted RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 RBPMSQ93062 196 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 ERGIC1Q969X5 290 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 S100PBPQ96BU1 408 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 GALNT14Q96FL9 552 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 COQ2Q96H96 371 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 CNTNAP3BQ96NU0 1288 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 SCGB3A2Q96PL1 93 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 AQP10Q96PS8 301 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 ARPC5LQ9BPX5 153 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 DCTN5Q9BTE1 182 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 CABLES2Q9BTV7 478 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 ZNF471Q9BX82 626 aaPredicted RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 CNTNAP3Q9BZ76 1288 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 MS4A7Q9GZW8 240 aaPredicted RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 TLNRD1Q9H1K6 362 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 IFT22Q9H7X7 185 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 MSL2Q9HCI7 577 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 UFSP2Q9NUQ7 469 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 C1orf123Q9NWV4 160 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 SDHAF2Q9NX18 166 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 GSKIPQ9P0R6 139 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 TUBD1Q9UJT1 453 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 RCL1Q9Y2P8 373 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 TMA7Q9Y2S6 64 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 LSM5Q9Y4Y9 91 aaKnown RBP3.9□□□□□ -1.79
NUP85-213ENST00000579838 RFNGQ9Y644 331 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 ATP23Q9Y6H3 246 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 CACNA1BQ00975 2339 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 DNAJC13O75165 2243 aa3.9□□□□□ -1.79
NUP85-213ENST00000579838 ZFHX4Q86UP3 3567 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 IGHV3OR15-7A0A075B7D8 119 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 A0A0G2JNJ9 132 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 C3orf85A0A1B0GTC6 90 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 A0A1B0GW55 424 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 IGSF23A1L1A6 192 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 ATP6V1G2-DDX39BF2Z307 99 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 F5H0A9 414 aaPredicted RBP3.89□□□□□ -1.79
NUP85-213ENST00000579838 M0R1B8 84 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 SHOXO15266 292 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 MPPED1O15442 326 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 TIMM8AO60220 97 aaPredicted RBP3.89□□□□□ -1.79
NUP85-213ENST00000579838 DEDDO75618 318 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 NXPH2O95156 264 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 NXPH3O95157 252 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 CNOT4O95628 575 aaKnown RBP3.89□□□□□ -1.79
NUP85-213ENST00000579838 DIRAS3O95661 229 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 SCGB1D2O95969 90 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 HAND1O96004 215 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 FGF2P09038 288 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 DUX4L2P0CJ85 424 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 DUX4L3P0CJ86 424 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 DUX4L4P0CJ87 422 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 DUX4L5P0CJ88 424 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 DUX4L6P0CJ89 424 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 DUX4L7P0CJ90 424 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 ZNF44P15621 663 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 OR3A1P47881 315 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 ID4P47928 161 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 ASCL1P50553 236 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 RND3P61587 244 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 NKX6-1P78426 367 aaPredicted RBP3.89□□□□□ -1.79
NUP85-213ENST00000579838 SRSF3P84103 164 aaKnown RBP3.89□□□□□ -1.79
NUP85-213ENST00000579838 NAAAQ02083 359 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 TGFBR3Q03167 851 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 FAM27E3Q08E93 113 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 TESK1Q15569 626 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 IZUMO4Q1ZYL8 232 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 ABCA11PQ4W5N1 156 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 PAN3Q58A45 887 aaKnown RBP3.89□□□□□ -1.79
NUP85-213ENST00000579838 UTF1Q5T230 341 aa3.89□□□□□ -1.79
NUP85-213ENST00000579838 SHEQ5VZ18 495 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms