RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 RCC1P18754 421 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 HLA-DRB3P79483 266 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF718Q3SXZ3 478 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 PCSK4Q6UW60 755 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 LYZL2Q7Z4W2 148 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 LDLRAD3Q86YD5 345 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 C1orf174Q8IYL3 243 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF565Q8N9K5 539 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 RELL2Q8NC24 303 aaPredicted RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 OR4A4PQ8NGN8 299 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 STOML3Q8TAV4 291 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 SECTM1Q8WVN6 248 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 PCDHB10Q9UN67 800 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 WASF3Q9UPY6 502 aa15.37■□□□□ 0.05
SMPD3-211ENST00000568373 HEATR1Q9H583 2144 aaKnown RBP15.37■□□□□ 0.05
SMPD3-211ENST00000568373 MAP1BP46821 2468 aaKnown RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 H7C1Q1 480 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SIRPB1O00241 398 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 RND3P61587 244 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SPIN3Q5JUX0 258 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SHEQ5VZ18 495 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 MBNL2Q5VZF2 373 aaKnown RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF474Q6S9Z5 364 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 TP53RKQ96S44 253 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 CXXC4Q9H2H0 198 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 FZR1Q9UM11 496 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SSUH2Q9Y2M2 353 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 ACACAQ13085 2346 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 IGKV1D-13A0A0B4J2D9 117 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 C3orf85A0A1B0GTC6 90 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SH2D1BO14796 132 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 IGKV1-13P0DP09 117 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 GCH1P30793 250 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 FABP6P51161 128 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 FAM74A1Q5RGS3 127 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 THOC7Q6I9Y2 204 aaKnown RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 FAM180AQ6UWF9 173 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF818PQ6ZRF7 136 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 FOXRED2Q8IWF2 684 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 RP1L1Q8IWN7 2480 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 RBPMSQ93062 196 aaKnown RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 CABLES2Q9BTV7 478 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 REG4Q9BYZ8 158 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SLC5A7Q9GZV3 580 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SHARPINQ9H0F6 387 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 HES4Q9HCC6 221 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 SDHAF2Q9NX18 166 aa15.36■□□□□ 0.05
SMPD3-211ENST00000568373 FBXO9Q9UK97 447 aaPredicted RBP15.36■□□□□ 0.05
SMPD3-211ENST00000568373 MFSD2BA6NFX1 497 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 GPR31O00270 319 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 ZNF497Q6ZNH5 498 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 MOB1BQ7L9L4 216 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 GAPTQ8N292 157 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 ANGPTL6Q8NI99 470 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 LHFPL5Q8TAF8 219 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 FAM57AQ8TBR7 257 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 SCNM1Q9BWG6 230 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 PFDN2Q9UHV9 154 aa15.35■□□□□ 0.05
SMPD3-211ENST00000568373 DEDDO75618 318 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 SRPXP78539 464 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 NAAAQ02083 359 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 SNTB1Q13884 538 aaKnown RBP15.34■□□□□ 0.05
SMPD3-211ENST00000568373 SMCO1Q147U7 214 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 TIMM23BQ5SRD1 257 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 FIP1L1Q6UN15 594 aaKnown RBP15.34■□□□□ 0.05
SMPD3-211ENST00000568373 Q6ZR03 302 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 TBC1D26Q86UD7 250 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 C11orf53Q8IXP5 236 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 OR10J5Q8NHC4 309 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 PLPPR1Q8TBJ4 325 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 S100PBPQ96BU1 408 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 ABHD17AQ96GS6 310 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 CYTL1Q9NRR1 136 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 ATMQ13315 3056 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 BSNQ9UPA5 3926 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 TPT1P13693 172 aaKnown RBP15.34■□□□□ 0.05
SMPD3-211ENST00000568373 SPERTQ8NA61 448 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 C17orf50Q8WW18 174 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 SFXN3Q9BWM7 321 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 TMEM222Q9H0R3 208 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 TLNRD1Q9H1K6 362 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 TMED3Q9Y3Q3 217 aa15.34■□□□□ 0.05
SMPD3-211ENST00000568373 HAND1O96004 215 aa15.33■□□□□ 0.04
SMPD3-211ENST00000568373 CEACAM8P31997 349 aaPredicted RBP15.33■□□□□ 0.04
SMPD3-211ENST00000568373 ZNF324BQ6AW86 544 aaPredicted RBP15.33■□□□□ 0.04
SMPD3-211ENST00000568373 MEX3BQ6ZN04 569 aaKnown RBP15.33■□□□□ 0.04
SMPD3-211ENST00000568373 ZNF826PQ6ZT77 177 aa15.33■□□□□ 0.04
SMPD3-211ENST00000568373 H1FOOQ8IZA3 346 aaPredicted RBP15.33■□□□□ 0.04
SMPD3-211ENST00000568373 KIRREL1Q96J84 757 aa15.33■□□□□ 0.04
SMPD3-211ENST00000568373 MSL2Q9HCI7 577 aa15.33■□□□□ 0.04
SMPD3-211ENST00000568373 OR2W1Q9Y3N9 320 aa15.33■□□□□ 0.04
SMPD3-211ENST00000568373 A0A1B0GWJ7 208 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 C1QTNF9BB2RNN3 333 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 NPIPB11E5RHQ5 1161 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 HOXD4P09016 255 aaPredicted RBP15.32■□□□□ 0.04
SMPD3-211ENST00000568373 HKR1P10072 659 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 ZNF83P51522 516 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 TMEM268Q5VZI3 342 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 SLC35G3Q8N808 338 aa15.32■□□□□ 0.04
SMPD3-211ENST00000568373 CCL28Q9NRJ3 127 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms