RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 UBE2CO00762 179 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 RNF224P0DH78 156 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 DUSP3P51452 185 aaPredicted RBP9.16□□□□□ -0.94
USB1-212ENST00000566082 SPINK9Q5DT21 86 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 FAM78BQ5VT40 261 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 OR2M3Q8NG83 312 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 MRGPRFQ96AM1 343 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 BSCL2Q96G97 398 aaPredicted RBP9.16□□□□□ -0.94
USB1-212ENST00000566082 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 SMDT1Q9H4I9 107 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 ZNF319Q9P2F9 582 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 TRAPPC1Q9Y5R8 145 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 LOC390937A0A1W2PQ73 354 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 LDLRAD4O15165 306 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 TMEM187Q14656 261 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 FFAR4Q5NUL3 377 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 SLC25A47Q6Q0C1 308 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 MS4A10Q96PG2 267 aa9.16□□□□□ -0.94
USB1-212ENST00000566082 NUDT16L1Q9BRJ7 211 aaKnown RBP9.16□□□□□ -0.94
USB1-212ENST00000566082 IGKV1D-8A0A087WSZ0 117 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 B4DEV8 164 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 PITX3O75364 302 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 CD5P06127 495 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 CYB561P49447 251 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 PPP1CBP62140 327 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 ZNF92Q03936 586 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 GUSBP11Q6P575 273 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 ZNF573Q86YE8 665 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 D2HGDHQ8N465 521 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 APH1AQ96BI3 265 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 WNT16Q9UBV4 365 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 VAX2Q9UIW0 290 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 GVINP1Q7Z2Y8 2422 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 A0A0U1RQV5 110 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 LRP5LA4QPB2 252 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 ZNF729A6NN14 1252 aaPredicted RBP9.15□□□□□ -0.94
USB1-212ENST00000566082 SLC25A6P12236 298 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 GABRA4P48169 554 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 TGFBR3Q03167 851 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.15□□□□□ -0.94
USB1-212ENST00000566082 MYPOPQ86VE0 399 aaPredicted RBP9.15□□□□□ -0.94
USB1-212ENST00000566082 OR4A16Q8NH70 328 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 CCDC74BQ96LY2 380 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 TP53RKQ96S44 253 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 MSL2Q9HCI7 577 aa9.15□□□□□ -0.94
USB1-212ENST00000566082 TRBV6-7A0A0A0MS04 114 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 IGKV1-9A0A0C4DH69 117 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 F6UZH7 168 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 NDUFS6O75380 124 aaKnown RBP9.15□□□□□ -0.95
USB1-212ENST00000566082 SCTP09683 121 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 BCL2P10415 239 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 NTF3P20783 257 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 RPP30P78346 268 aaKnown RBP9.15□□□□□ -0.95
USB1-212ENST00000566082 PRAMEF5Q5TYX0 476 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 PRAMEF6Q5VXH4 476 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 Q96M66 194 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 RIMS4Q9H426 269 aaPredicted RBP9.15□□□□□ -0.95
USB1-212ENST00000566082 NAT8Q9UHE5 227 aa9.15□□□□□ -0.95
USB1-212ENST00000566082 SPINK4O60575 86 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 IGHMP01871 453 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 HSPB1P04792 205 aaKnown RBP9.14□□□□□ -0.95
USB1-212ENST00000566082 MGST1P10620 155 aaKnown RBP9.14□□□□□ -0.95
USB1-212ENST00000566082 EDDM3BP56851 147 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 KRTDAPP60985 99 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 ARG2P78540 354 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 CCL7P80098 99 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
USB1-212ENST00000566082 TMEM211Q6ICI0 200 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 OR10G4Q8NGN3 311 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 OR10G9Q8NGN4 311 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 OR10G7Q8NGN6 311 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 TMEM222Q9H0R3 208 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 PISDQ9UG56 409 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 R4GN57 208 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 NOTCH4Q99466 2003 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 LINC01387J3KSC0 135 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 NPIPB7O75200 414 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 OR8U8P0C7N1 319 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 CCL3P10147 92 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 BCL3P20749 454 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 OR10S1Q8NGN2 331 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 BOD1Q96IK1 185 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 ALPK3Q96L96 1907 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 PLXNB3Q9ULL4 1909 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 IGSF23A1L1A6 192 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 CST2P09228 141 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 PSG2P11465 335 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 RAC1P63000 192 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 CCL20P78556 96 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 CDCP2Q5VXM1 449 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 ASPHD2Q6ICH7 369 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 CNEP1R1Q8N9A8 125 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 OR2V1Q8NHB1 315 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 Q8WTZ3 238 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 MOB3AQ96BX8 217 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 WFIKKN1Q96NZ8 548 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 GINS3Q9BRX5 216 aa9.14□□□□□ -0.95
USB1-212ENST00000566082 PARD6AQ9NPB6 346 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms