RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 UTF1Q5T230 341 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 Q6ZPA2 131 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 Q8NFD4 153 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 OR56B4Q8NH76 319 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 PLPPR1Q8TBJ4 325 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 MRGPRDQ8TDS7 321 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 LEAP2Q969E1 77 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 SMIM19Q96E16 107 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 LINC00574Q9H8X3 128 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 TMEM138Q9NPI0 162 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 IL36GQ9NZH8 169 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 ST3GAL6Q9Y274 331 aa11.29□□□□□ -0.6
SNX6-210ENST00000557341 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 NPIPB11E5RHQ5 1161 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 OR7C1O76099 320 aaPredicted RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 CDRT1O95170 752 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 IGHV3-7P01780 117 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 CSTBP04080 98 aaKnown RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 SNRNP70P08621 437 aaKnown RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 MYL12AP19105 171 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 ZNF93P35789 620 aaPredicted RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 GNG10P50151 68 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 RBM11P57052 281 aaKnown RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 LTC4SQ16873 150 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 NHLRC3Q5JS37 347 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 C9orf152Q5JTZ5 239 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 OR2G6Q5TZ20 316 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 ASCL4Q6XD76 172 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 LINC00596Q86U02 117 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 OSR2Q8N2R0 312 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 OR10A7Q8NGE5 316 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 MRAPQ8TCY5 172 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 MYDGFQ969H8 173 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 S100A13Q99584 98 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 DPCDQ9BVM2 203 aaPredicted RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 METTL9Q9H1A3 318 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 IFT22Q9H7X7 185 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 PAK1IP1Q9NWT1 392 aaPredicted RBP11.28□□□□□ -0.6
SNX6-210ENST00000557341 PSG11Q9UQ72 335 aa11.28□□□□□ -0.6
SNX6-210ENST00000557341 BAG2O95816 211 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 SERPINA2P20848 420 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 BDKRB2P30411 391 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 RAB7AP51149 207 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 SLC35A2P78381 396 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 RIPK1Q13546 671 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 HES1Q14469 280 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 MPV17LQ2QL34 196 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 SLC16A12Q6ZSM3 486 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 OR8H3Q8N146 312 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 SUMF2Q8NBJ7 301 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 OR10X1Q8NGY0 326 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 OR52N1Q8NH53 320 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 AURKAIP1Q9NWT8 199 aaPredicted RBP11.27□□□□□ -0.61
SNX6-210ENST00000557341 ING4Q9UNL4 249 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 DIMT1Q9UNQ2 313 aaKnown RBP11.27□□□□□ -0.61
SNX6-210ENST00000557341 ZNF281Q9Y2X9 895 aa11.27□□□□□ -0.61
SNX6-210ENST00000557341 EXOSC1Q9Y3B2 195 aaKnown RBP11.27□□□□□ -0.61
SNX6-210ENST00000557341 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 TMEM30CPA0ZSE6 113 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 PSMB11A5LHX3 300 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A18PA6NE21 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A16PA6NEW6 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A20PA6NIJ5 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A12PA8MX19 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A5PA8MXJ8 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 EBAG9O00559 213 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 GEMIN2O14893 280 aaKnown RBP11.26□□□□□ -0.61
SNX6-210ENST00000557341 ZNF780AO75290 641 aaPredicted RBP11.26□□□□□ -0.61
SNX6-210ENST00000557341 CLIC3O95833 236 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A15PP0C7V4 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A13PP0C7W8 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A14PP0C7W9 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FAM90A24PP0C7X0 464 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 TMEM11P17152 192 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 MED21Q13503 144 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 FOXB2Q5VYV0 432 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 DRAM1Q8N682 238 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 SETD9Q8NE22 299 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 WFDC9Q8NEX5 89 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 OR13C5Q8NGS8 318 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 RFESDQ8TAC1 157 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 ZNF184Q99676 751 aaPredicted RBP11.26□□□□□ -0.61
SNX6-210ENST00000557341 ZNF581Q9P0T4 197 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 CKLFQ9UBR5 152 aa11.26□□□□□ -0.61
SNX6-210ENST00000557341 TRAV39A0A0B4J263 110 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 HSD17B6O14756 317 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 OGG1O15527 345 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 FGF16O43320 207 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 IGLL1P15814 213 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 LOXL3P58215 753 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
SNX6-210ENST00000557341 YIF1BQ5BJH7 314 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms