RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 RIMS4Q9H426 269 aaPredicted RBP15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 WFDC1Q9HC57 220 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 RCL1Q9Y2P8 373 aaKnown RBP15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 UBE2J1Q9Y385 318 aaPredicted RBP15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 TMEM56-RWDD3S4R434 201 aa15.77■□□□□ 0.11
PRPF40B-208ENST00000548436 PTPRBP23467 1997 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 TRBV6-6A0A0A6YYG2 114 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 ATG12O94817 140 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 CTXN2P0C2S0 81 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 UBE2NP61088 152 aaKnown RBP15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 PJVKQ0ZLH3 352 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 ALKBH6Q3KRA9 238 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 Q6P435 159 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 ZNF880Q6PDB4 577 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 IL34Q6ZMJ4 242 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 FAM214BQ7L5A3 538 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 SELENOHQ8IZQ5 122 aaKnown RBP15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 UBAC2Q8NBM4 344 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 TMEM231Q9H6L2 316 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 GLRX2Q9NS18 164 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 CFAP47Q6ZTR5 3102 aa15.76■□□□□ 0.11
PRPF40B-208ENST00000548436 DNASE2O00115 360 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 GPR137BO60478 399 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 P2RY1P47900 373 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 SRPXP78539 464 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 TGFBR3Q03167 851 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 GABRA6Q16445 453 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 FAM76BQ5HYJ3 339 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 PRSS33Q8NF86 280 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 RTL8AQ9BWD3 113 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 IFT22Q9H7X7 185 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 CDH20Q9HBT6 801 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 ZFP57Q9NU63 452 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 POMT1Q9Y6A1 747 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 J3QW42 95 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 DEGS1O15121 323 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 GUSBP1Q15486 140 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 IGFL2Q6UWQ7 119 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 ZNF695Q8IW36 515 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 SCCPDHQ8NBX0 429 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 LILRB1Q8NHL6 650 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 WNT2BQ93097 391 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 NKX6-2Q9C056 277 aaPredicted RBP15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 ARV1Q9H2C2 271 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 PRR14LQ5THK1 2151 aa15.75■□□□□ 0.11
PRPF40B-208ENST00000548436 ZNF44P15621 663 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 NHLH2Q02577 135 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 TCF15Q12870 199 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 MRPL49Q13405 166 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 GPR157Q5UAW9 335 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 SLC25A40Q8TBP6 338 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 DMXL1Q9Y485 3027 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 LRP5LA4QPB2 252 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 FAM74A7A6NL05 159 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 CDS2O95674 445 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 ATF4P18848 351 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 ID4P47928 161 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 HLA-DRB3P79483 266 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 GUCA2BQ16661 112 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 FAM74A3Q4VXF1 159 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 ZNF324BQ6AW86 544 aaPredicted RBP15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 Q6ZT83 130 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 TSNAXQ99598 290 aaKnown RBP15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 C11orf1Q9H5F2 150 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 RHOFQ9HBH0 211 aa15.74■□□□□ 0.11
PRPF40B-208ENST00000548436 GTF3C1Q12789 2109 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 IGHV3-64DA0A0J9YX35 117 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 TNFSF12O43508 249 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 ERVK11-1P61568 191 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 C10orf91Q5T1B1 145 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 BTNL8Q6UX41 500 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 CNEP1R1Q8N9A8 125 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 TREM1Q9NP99 234 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 FAM96BQ9Y3D0 163 aa15.73■□□□□ 0.11
PRPF40B-208ENST00000548436 TRAV39A0A0B4J263 110 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 UCP1P25874 307 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 KIR2DL2P43627 348 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 CAV2P51636 162 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 UCP2P55851 309 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 PSG7Q13046 419 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 VWA1Q6PCB0 445 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 PUSL1Q8N0Z8 303 aaKnown RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 C9orf106Q8NAJ2 232 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 OR1J1Q8NGS3 322 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 KIRREL1Q96J84 757 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 ADAT1Q9BUB4 502 aaKnown RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 F8W036 122 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 SIRPB1O00241 398 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 CDIPTO14735 213 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 ADAM20O43506 726 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 PGLYRP1O75594 196 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 OR2H2O95918 312 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 RAC2P15153 192 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 MUC1P15941 1255 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 BLOC1S1P78537 153 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 ZNF154Q13106 437 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 SMUG1Q53HV7 270 aa15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 INO80CQ6PI98 192 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 H1FOOQ8IZA3 346 aaPredicted RBP15.72■□□□□ 0.11
PRPF40B-208ENST00000548436 OR10J5Q8NHC4 309 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms