RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 XAF1Q6GPH4 301 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 PACRGLQ8N7B6 248 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 SMIM19Q96E16 107 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 OR5M11Q96RB7 305 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
DDX55-212ENST00000544738 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 METTL9Q9H1A3 318 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 PCDHB16Q9NRJ7 776 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 PAK1IP1Q9NWT1 392 aaPredicted RBP12.95□□□□□ -0.34
DDX55-212ENST00000544738 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 KIF25Q9UIL4 384 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 AMMECR1Q9Y4X0 333 aaPredicted RBP12.95□□□□□ -0.34
DDX55-212ENST00000544738 LY6LH3BQJ8 138 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 HSPB6O14558 160 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 OR2F2O95006 317 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 HTR3BO95264 441 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 CSTBP04080 98 aaKnown RBP12.94□□□□□ -0.34
DDX55-212ENST00000544738 ZNF93P35789 620 aaPredicted RBP12.94□□□□□ -0.34
DDX55-212ENST00000544738 KRTAP10-11P60412 298 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 RBM39Q14498 530 aaKnown RBP12.94□□□□□ -0.34
DDX55-212ENST00000544738 NHLRC3Q5JS37 347 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 Q6ZS46 218 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 SLC16A12Q6ZSM3 486 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 WFDC9Q8NEX5 89 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 OR13A1Q8NGR1 328 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 CYGBQ8WWM9 190 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 RBM14Q96PK6 669 aaKnown RBP12.94□□□□□ -0.34
DDX55-212ENST00000544738 SLC25A33Q9BSK2 321 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 LINC00574Q9H8X3 128 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 CALYQ9NYX4 217 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 ST3GAL6Q9Y274 331 aa12.94□□□□□ -0.34
DDX55-212ENST00000544738 M0QZK8 103 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 ZNF780AO75290 641 aaPredicted RBP12.93□□□□□ -0.34
DDX55-212ENST00000544738 CLIC3O95833 236 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 IL1AP01583 271 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 CD24P25063 80 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 BDKRB2P30411 391 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 OR3A4PP47883 348 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 RIPK1Q13546 671 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 LRRC36Q1X8D7 754 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 PIGYQ3MUY2 71 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 RSBN1Q5VWQ0 802 aaPredicted RBP12.93□□□□□ -0.34
DDX55-212ENST00000544738 CENPVQ7Z7K6 275 aaPredicted RBP12.93□□□□□ -0.34
DDX55-212ENST00000544738 LINC00596Q86U02 117 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 OSR2Q8N2R0 312 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 DHRSXQ8N5I4 330 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 OR10K1Q8NGX5 313 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 OR52N1Q8NH53 320 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 RPEQ96AT9 228 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 IFT22Q9H7X7 185 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 IDI2-AS1Q9NZ38 188 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 CKLFQ9UBR5 152 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
DDX55-212ENST00000544738 SIRT4Q9Y6E7 314 aaPredicted RBP12.93□□□□□ -0.34
DDX55-212ENST00000544738 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 NPIPB11E5RHQ5 1161 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 J3QR06 171 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 OR7C1O76099 320 aaPredicted RBP12.92□□□□□ -0.34
DDX55-212ENST00000544738 CDRT1O95170 752 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 GZMHP20718 246 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 RBM11P57052 281 aaKnown RBP12.92□□□□□ -0.34
DDX55-212ENST00000544738 Q499Y3 187 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 YIF1BQ5BJH7 314 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 THNSL2Q86YJ6 484 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 SUMF2Q8NBJ7 301 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 OR5AU1Q8NGC0 362 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 PLPPR1Q8TBJ4 325 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 GHSRQ92847 366 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 TOMM40LQ969M1 308 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 DPCDQ9BVM2 203 aaPredicted RBP12.92□□□□□ -0.34
DDX55-212ENST00000544738 HSPE1-MOB4S4R3N1 261 aa12.92□□□□□ -0.34
DDX55-212ENST00000544738 TRBV5-5A0A0J9YX44 114 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 A0A1W2PRX2 142 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 C3orf84H3BNL1 204 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 GPX5O75715 221 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 TAS2R43P59537 309 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 ADARB1P78563 741 aaKnown RBP12.91□□□□□ -0.34
DDX55-212ENST00000544738 CD83Q01151 205 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 ST3GAL4Q11206 333 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 MADCAM1Q13477 382 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 GPR176Q14439 515 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 MPV17LQ2QL34 196 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 TMEM95Q3KNT9 176 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 ABCA11PQ4W5N1 156 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 DMKNQ6E0U4 476 aaPredicted RBP12.91□□□□□ -0.34
DDX55-212ENST00000544738 MRGPRDQ8TDS7 321 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 ZNF184Q99676 751 aaPredicted RBP12.91□□□□□ -0.34
DDX55-212ENST00000544738 KRTAP17-1Q9BYP8 105 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 CLEC2DQ9UHP7 191 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 PSG11Q9UQ72 335 aa12.91□□□□□ -0.34
DDX55-212ENST00000544738 EFCAB10A6NFE3 127 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 LALBAP00709 142 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 LPLP06858 475 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 GTF2F2P13984 249 aa12.9□□□□□ -0.34
DDX55-212ENST00000544738 IGFBP3P17936 291 aaPredicted RBP12.9□□□□□ -0.34
DDX55-212ENST00000544738 SERPINA2P20848 420 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms