RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 UPK1BO75841 260 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TRAPPC6AO75865 159 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 RPP14O95059 124 aaKnown RBP2.93□□□□□ -1.94
SNHG1-217ENST00000541578 VAPBO95292 243 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TTC4O95801 387 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 FAM107AO95990 144 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 PTTG1O95997 202 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 RPN2P04844 631 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 PGA4P0DJD7 388 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 PGA3P0DJD8 388 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 MLNP12872 115 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 DTYMKP23919 212 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 IL12BP29460 328 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 SERPINB1P30740 379 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 CTRLP40313 264 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 KIR3DL2P43630 455 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF138P52744 262 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TAS2R39P59534 338 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 UBE2KP61086 200 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 GNGT1P63211 74 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 BAMBIQ13145 260 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 KIR2DS1Q14954 304 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 KCNJ8Q15842 424 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 GCSAMLQ5JQS6 135 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 CLEC18BQ6UXF7 455 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 DCXRQ7Z4W1 244 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 SETD3Q86TU7 594 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF429Q86V71 674 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ARRDC1Q8N5I2 433 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 UBL4BQ8N7F7 174 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 C12orf29Q8N999 325 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 OR10AD1Q8NGE0 317 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 OR5AR1Q8NGP9 310 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 OR51A7Q8NH64 312 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 GRPEL2Q8TAA5 225 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 LGALS14Q8TCE9 139 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 DOK4Q8TEW6 326 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 NAT14Q8WUY8 206 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM239Q8WW34 195 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM159Q96B96 161 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 DGCR14Q96DF8 476 aaKnown RBP2.93□□□□□ -1.94
SNHG1-217ENST00000541578 PDXPQ96GD0 296 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 SLC35E1Q96K37 410 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 FAM210BQ96KR6 192 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 RNF145Q96MT1 663 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 BBS2Q9BXC9 721 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 HDHD2Q9H0R4 259 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 METTL8Q9H825 291 aaKnown RBP2.93□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM27Q9HBJ8 222 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 SDHAF2Q9NX18 166 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 USH1CQ9Y6N9 552 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 ANKRD17O75179 2603 aaKnown RBP2.93□□□□□ -1.94
SNHG1-217ENST00000541578 LRBAP50851 2863 aa2.93□□□□□ -1.94
SNHG1-217ENST00000541578 LRRK2Q5S007 2527 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 NKX2-6A6NCS4 301 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 IQCF5A8MTL0 148 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 EVPLLA8MZ36 301 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 hCG_2039718K7EN88 272 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 TXNDC9O14530 226 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 MYL12BO14950 172 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 SC5DO75845 299 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 CCNKO75909 580 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 AHSA1O95433 338 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 FABP1P07148 127 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 KRTAP1-4P0C5Y4 121 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 GIMD1P0DJR0 217 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ADRB3P13945 408 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 OMGP23515 440 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 HTR1DP28221 377 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 GGT2P36268 569 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 NKX2-5P52952 324 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 HCCSP53701 268 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 SYNJ2BPP57105 145 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 OR2B8PP59922 312 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 AP1S1P61966 158 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 RPL31P62899 125 aaKnown RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 LRRC63Q05C16 580 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 PSG7Q13046 419 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 DAZ2Q13117 558 aaKnown RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 FLOT2Q14254 428 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 POU6F1Q14863 301 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 IRF4Q15306 451 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF79Q15937 498 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 TAL2Q16559 108 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 LINC00303Q3SY05 128 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 TFDP3Q5H9I0 405 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 CLEC6AQ6EIG7 209 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ELP2Q6IA86 826 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 TTC33Q6PID6 262 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-217ENST00000541578 IL34Q6ZMJ4 242 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 LRRC8AQ8IWT6 810 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ENTHD1Q8IYW4 607 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 STPG2Q8N412 459 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 NPWQ8N729 165 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 LRRC52Q8N7C0 313 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 LINC01555Q8NAE3 123 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 GPR26Q8NDV2 337 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 UBA3Q8TBC4 463 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 ABHD3Q8WU67 409 aa2.92□□□□□ -1.94
SNHG1-217ENST00000541578 DNAJC9Q8WXX5 260 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms