RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FAM74A7A6NL05 159 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 TRDCB7Z8K6 153 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 P01737 135 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 CD40P25942 277 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 NPBWR2P48146 333 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 FAM74A3Q4VXF1 159 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 RNF165Q6ZSG1 346 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 NUP37Q8NFH4 326 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 OR10D3Q8NH80 312 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 A0A1B0GTH9 108 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 MEX3AA1L020 520 aaKnown RBP8.79□□□□□ -1
COL4A6-208ENST00000538570 CCR2P41597 374 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 C21orf58P58505 322 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 OR4B1Q8NGF8 309 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 R3HDM4Q96D70 268 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 ABHD14AQ9BUJ0 271 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 LOC390937A0A1W2PQ73 354 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 MELTFP08582 738 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 LGALS7P47929 136 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 GAB4Q2WGN9 574 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 ZNF683Q8IZ20 524 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 D2HGDHQ8N465 521 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 FGF14Q92915 247 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 TIMP4Q99727 224 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 C2CD4DB7Z1M9 353 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 RBPMS2Q6ZRY4 209 aaKnown RBP8.78□□□□□ -1
COL4A6-208ENST00000538570 C17orf47Q8NEP4 570 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 MRPL37Q9BZE1 423 aaKnown RBP8.78□□□□□ -1
COL4A6-208ENST00000538570 CHODLQ9H9P2 273 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 PIPOXQ9P0Z9 390 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 MPC1Q9Y5U8 109 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 SERTM1A2A2V5 107 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 SYNGR2O43760 224 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 TCL1AP56279 114 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 GUCA2BQ16661 112 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 GPR27Q9NS67 375 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 TREM2Q9NZC2 230 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 VAX2Q9UIW0 290 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 KCNE1BA0A087WTH5 132 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 OR4C46A6NHA9 309 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 GABRG2P18507 467 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 CD1BP29016 333 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 CTAG1AP78358 180 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 TNFRSF9Q07011 255 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 PSG5Q15238 335 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 ZNF141Q15928 474 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 PERPQ96FX8 193 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 SLX4Q8IY92 1834 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 NHSL1Q5SYE7 1610 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 ZNF729A6NN14 1252 aaPredicted RBP8.78□□□□□ -1
COL4A6-208ENST00000538570 C3orf80F5H4A9 247 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 OR2Y1Q8NGV0 311 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 RPS4Y2Q8TD47 263 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 ABHD1Q96SE0 405 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 SSC5DA1L4H1 1573 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 KLK10O43240 276 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 ADAP1O75689 374 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 CCL2P13500 99 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
COL4A6-208ENST00000538570 SLC25A30Q5SVS4 291 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 OR10W1Q8NGF6 305 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 OR5R1Q8NH85 324 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 ASB10Q8WXI3 467 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 WDR13Q9H1Z4 485 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 ASCL3Q9NQ33 180 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 COA4Q9NYJ1 87 aa8.78□□□□□ -1
COL4A6-208ENST00000538570 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1
COL4A6-208ENST00000538570 HIST1H1EP10412 219 aaKnown RBP8.77□□□□□ -1
COL4A6-208ENST00000538570 HMGA2P52926 109 aa8.77□□□□□ -1
COL4A6-208ENST00000538570 MRPS11P82912 194 aaKnown RBP8.77□□□□□ -1
COL4A6-208ENST00000538570 ARL17AQ8IVW1 177 aa8.77□□□□□ -1
COL4A6-208ENST00000538570 OR8B12Q8NGG6 310 aa8.77□□□□□ -1
COL4A6-208ENST00000538570 LYZL6O75951 148 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 DLX1P56177 255 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 SIGLEC14Q08ET2 396 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 SRSF9Q13242 221 aaKnown RBP eCLIP8.77□□□□□ -1.01
COL4A6-208ENST00000538570 EIF3IQ13347 325 aaKnown RBP8.77□□□□□ -1.01
COL4A6-208ENST00000538570 SSPNQ14714 243 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 CLEC18BQ6UXF7 455 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 OR4P4Q8NGL7 312 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 EID2BQ96D98 161 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 RAB1BQ9H0U4 201 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 ZFP64Q9NPA5 681 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 PEF1Q9UBV8 284 aaKnown RBP8.77□□□□□ -1.01
COL4A6-208ENST00000538570 CORTO00230 105 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 RECKO95980 971 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 PAFAH1B2P68402 229 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 FOXC1Q12948 553 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 TMEM136Q6ZRR5 245 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 ITGB4P16144 1822 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 FAM90A27PA6NNH2 459 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 LINC01565O15544 149 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 CHST1O43916 411 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 MPZL1O95297 269 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 CA1P00915 261 aaPredicted RBP8.77□□□□□ -1.01
COL4A6-208ENST00000538570 COL8A1P27658 744 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 SRD5A2P31213 254 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 GUSBP11Q6P575 273 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 MSRB3Q8IXL7 192 aa8.77□□□□□ -1.01
COL4A6-208ENST00000538570 RNF133Q8WVZ7 376 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms