RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 KCNG3Q8TAE7 436 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 FAM216AQ8WUB2 273 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 C17orf50Q8WW18 174 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 GAL3ST2Q9H3Q3 398 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 TXNL4BQ9NX01 149 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 FAM96BQ9Y3D0 163 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 DNHD1Q96M86 4753 aa18.5■□□□□ 0.55
SFSWAP-204ENST00000535399 TRIM64CA6NLI5 447 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 PDCD5O14737 125 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 HOXA3O43365 443 aaPredicted RBP18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 CDK2P24941 298 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 GDNFP39905 211 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 GLP1RP43220 463 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 RPS27AP62979 156 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 RAB12Q6IQ22 244 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 BAIAP2L2Q6UXY1 529 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 HEPN1Q6WQI6 88 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 OR11H6Q8NGC7 330 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 OR13D1Q8NGV5 346 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 CYYR1Q96J86 154 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 TM2D1Q9BX74 207 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 TMEM59Q9BXS4 323 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 OR51E2Q9H255 320 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 PEX16Q9Y5Y5 336 aa18.49■□□□□ 0.55
SFSWAP-204ENST00000535399 KBTBD11-OT1A0A1B0GTJ5 212 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 TMEM30CPA0ZSE6 113 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 ZNF729A6NN14 1252 aaPredicted RBP18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 ODF3BA8MYP8 253 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 FBP1P09467 338 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 FUT3P21217 361 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 CLDN12P56749 244 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 ZNF497Q6ZNH5 498 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 ZNF565Q8N9K5 539 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 TMEM133Q9H2Q1 129 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 LINC00574Q9H8X3 128 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 ZMAT3Q9HA38 289 aaKnown RBP18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 SSR3Q9UNL2 185 aa18.48■□□□□ 0.55
SFSWAP-204ENST00000535399 TRAV39A0A0B4J263 110 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 MCRIP1C9JLW8 97 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 PDCD6O75340 191 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 GLAP06280 429 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 RNASE1P07998 156 aaKnown RBP18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 ARSBP15848 533 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 CD36P16671 472 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 RAB3BP20337 219 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 OMGP23515 440 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 GADD45AP24522 165 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 CFPP27918 469 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 HES5Q5TA89 166 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 ZNF626Q68DY1 528 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 OR2W3Q7Z3T1 314 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 NR2C2APQ86WQ0 139 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 TMEM86BQ8N661 226 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 OR51D1Q8NGF3 324 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 MRGPRDQ8TDS7 321 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 NEK7Q8TDX7 302 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 FAM3DQ96BQ1 224 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 CALYQ9NYX4 217 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 ZNRD1Q9P1U0 126 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 FBLN5Q9UBX5 448 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 STEAP1Q9UHE8 339 aa18.47■□□□□ 0.55
SFSWAP-204ENST00000535399 A0A0A6YYD4 124 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 IGHV2-26A0A0B4J1V2 119 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 IFITM5A6NNB3 132 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 H3BUI4 141 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 MT-ND4P03905 459 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 RBM39Q14498 530 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 SSMEM1Q8WWF3 244 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 CHCHD6Q9BRQ6 235 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 NICN1Q9BSH3 213 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 LPAR5Q9H1C0 372 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 ETAA1Q9NY74 926 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 KIAA2026Q5HYC2 2103 aa18.46■□□□□ 0.55
SFSWAP-204ENST00000535399 NPIPB11E5RHQ5 1161 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 LDLRAD4O15165 306 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 PAHP00439 452 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 IL1AP01583 271 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 ARG1P05089 322 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 JUNBP17275 347 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 CHATP28329 748 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 IER3P46695 156 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 C2orf76Q3KRA6 126 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 LDLRAD2Q5SZI1 272 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 LHFPL4Q7Z7J7 247 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 GAPTQ8N292 157 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 BEND2Q8NDZ0 799 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 DYRK2Q92630 601 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 CLEC7AQ9BXN2 247 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 VCX3AQ9NNX9 186 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 POMT1Q9Y6A1 747 aa18.45■□□□□ 0.54
SFSWAP-204ENST00000535399 IGHV4-59P01825 116 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 CD34P28906 385 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 RANBP1P43487 201 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 LGALS4P56470 323 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 OR52W1Q6IF63 320 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 FAM89BQ8N5H3 189 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 KIRREL1Q96J84 757 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 MEGF9Q9H1U4 602 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 TNFRSF19Q9NS68 423 aa18.44■□□□□ 0.54
SFSWAP-204ENST00000535399 A0A087X0M5 115 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms