RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 HES4Q9HCC6 221 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 HMG20AQ9NP66 347 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 AKIP1Q9NQ31 210 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 MRM2Q9UI43 246 aaKnown RBP9.88□□□□□ -0.83
CAPN1-223ENST00000533079 SESN1Q9Y6P5 492 aa9.88□□□□□ -0.83
CAPN1-223ENST00000533079 TRAV1-2A0A0B4J238 106 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 ACOD1A6NK06 481 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 TGFBR1P36897 503 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 EDDM3BP56851 147 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 TP53I3Q53FA7 332 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 YIF1BQ5BJH7 314 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 PLCXD3Q63HM9 321 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 C22orf42Q6IC83 251 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 GDPD3Q7L5L3 318 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 OR2W3Q7Z3T1 314 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF679Q8IYX0 411 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 COMMD1Q8N668 190 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF676Q8N7Q3 588 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 ZFP41Q8N8Y5 198 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 THRSPQ92748 146 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 AMELYQ99218 206 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 TMED9Q9BVK6 235 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 TMEM133Q9H2Q1 129 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 ZCCHC4Q9H5U6 513 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 GNG8Q9UK08 70 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 LINC00312Q9Y6C7 94 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 DNAH1Q9P2D7 4330 aa9.87□□□□□ -0.83
CAPN1-223ENST00000533079 TRBV2A0A0J9YWF9 115 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 hADV38S2A0JD32 116 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 NUDT19A8MXV4 375 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 ARL6IP5O75915 188 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 CDRT1O95170 752 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 LYL1P12980 280 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 S100A5P33763 92 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 SDC2P34741 201 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 HAAOP46952 286 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF45Q02386 682 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 RIPPLY1Q0D2K3 151 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 ALKBH1Q13686 389 aaKnown RBP9.86□□□□□ -0.83
CAPN1-223ENST00000533079 ACSM3Q53FZ2 586 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 C9orf66Q5T8R8 295 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 C8orf86Q6ZUL3 223 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 TCF23Q7RTU1 214 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 OR8H2Q8N162 312 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 ASCC1Q8N9N2 400 aaKnown RBP9.86□□□□□ -0.83
CAPN1-223ENST00000533079 OR4P4Q8NGL7 312 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 CHPT1Q8WUD6 406 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 AP3S1Q92572 193 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 MROQ9BYG7 248 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 DPM3Q9P2X0 92 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 OR14J1Q9UGF5 321 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 SLC22A13Q9Y226 551 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 KLHDC2Q9Y2U9 406 aa9.86□□□□□ -0.83
CAPN1-223ENST00000533079 PNMA8CA0A1B0GUJ8 204 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 TMEM212A6NML5 194 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 PRR32B1ATL7 298 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF737O75373 536 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 AMY1AP04745 511 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 AMY2AP04746 511 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 UCHL1P09936 223 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 MPZP25189 248 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 CD40LGP29965 261 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 CEACAM3P40198 252 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 RPS11P62280 158 aaKnown RBP eCLIP9.85□□□□□ -0.83
CAPN1-223ENST00000533079 CEACAM19Q7Z692 300 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 RTN4RL2Q86UN3 420 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 MFSD4AQ8N468 514 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 YIPF7Q8N8F6 280 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 KLHL30-AS1Q8NEE0 82 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF596Q8TC21 504 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 THEM6Q8WUY1 208 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 ACOT12Q8WYK0 555 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 CREB3L1Q96BA8 519 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 KCTD12Q96CX2 325 aaKnown RBP9.85□□□□□ -0.83
CAPN1-223ENST00000533079 ZNF488Q96MN9 340 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 BARHL1Q9BZE3 327 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 MOB4Q9Y3A3 225 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
CAPN1-223ENST00000533079 OR4C45A6NMZ5 311 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 NRASP01111 189 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 IGLV3-1P01715 115 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 OR3A4PP47883 348 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 RIDAP52758 137 aaKnown RBP9.84□□□□□ -0.83
CAPN1-223ENST00000533079 PPP5CP53041 499 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 ERVK11-1P61568 191 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 SLC35B1P78383 322 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 OR52W1Q6IF63 320 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 MOB3CQ70IA8 216 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 CCDC190Q86UF4 302 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 COMMD2Q86X83 199 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 OR5M8Q8NGP6 311 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 OR2G2Q8NGZ5 317 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 RCHY1Q96PM5 261 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 PKIBQ9C010 78 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 FRRS1LQ9P0K9 344 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 HHLA2Q9UM44 414 aa9.84□□□□□ -0.83
CAPN1-223ENST00000533079 TRBV5-5A0A0J9YX44 114 aa9.83□□□□□ -0.84
CAPN1-223ENST00000533079 PQLC2LA1A4F0 135 aa9.83□□□□□ -0.84
CAPN1-223ENST00000533079 LEUTXA8MZ59 168 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms