RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 C10orf99Q6UWK7 81 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 ASCL4Q6XD76 172 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 THNSL2Q86YJ6 484 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 OR10K1Q8NGX5 313 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 PLPPR1Q8TBJ4 325 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 GPR148Q8TDV2 347 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 LEAP2Q969E1 77 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 FAM192AQ9GZU8 254 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 S100A14Q9HCY8 104 aa13.38□□□□□ -0.27
CPSF1-207ENST00000531727 FGF20Q9NP95 211 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-207ENST00000531727 IGHV3-7P01780 117 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 PF4P02776 101 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 CD2P06729 351 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 SNRNP70P08621 437 aaKnown RBP13.37□□□□□ -0.27
CPSF1-207ENST00000531727 MADCAM1Q13477 382 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 CCDC58Q4VC31 144 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 PQLC1Q8N2U9 271 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 OR10A7Q8NGE5 316 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 OR56B4Q8NH76 319 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 MRGPRDQ8TDS7 321 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 PSG11Q9UQ72 335 aa13.37□□□□□ -0.27
CPSF1-207ENST00000531727 A0A1W2PPI3 338 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 HTR3BO95264 441 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 SSTR5P35346 364 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 ETV1P50549 477 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 RAB7AP51149 207 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 SLC35A2P78381 396 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 SMN1Q16637 294 aaKnown RBP13.36□□□□□ -0.27
CPSF1-207ENST00000531727 LTC4SQ16873 150 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 KHDC1LQ5JSQ8 128 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 XAF1Q6GPH4 301 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 SLC16A12Q6ZSM3 486 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 OR8H3Q8N146 312 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 OSR2Q8N2R0 312 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 DRAM1Q8N682 238 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 RFESDQ8TAC1 157 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 DPCDQ9BVM2 203 aaPredicted RBP13.36□□□□□ -0.27
CPSF1-207ENST00000531727 IFT22Q9H7X7 185 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 IL36GQ9NZH8 169 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 ST3GAL6Q9Y274 331 aa13.36□□□□□ -0.27
CPSF1-207ENST00000531727 PSMB11A5LHX3 300 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 WBP4O75554 376 aaKnown RBP13.35□□□□□ -0.27
CPSF1-207ENST00000531727 CDRT1O95170 752 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 TMEM11P17152 192 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 DCKP27707 260 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 GNG10P50151 68 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 RBM11P57052 281 aaKnown RBP13.35□□□□□ -0.27
CPSF1-207ENST00000531727 DIAPH2-AS1Q14236 149 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 SUMF2Q8NBJ7 301 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 ZNF555Q8NEP9 628 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 RCC1LQ96I51 464 aaKnown RBP13.35□□□□□ -0.27
CPSF1-207ENST00000531727 METTL9Q9H1A3 318 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 TMEM138Q9NPI0 162 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 ZNF581Q9P0T4 197 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 ING4Q9UNL4 249 aa13.35□□□□□ -0.27
CPSF1-207ENST00000531727 TRAV39A0A0B4J263 110 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 CLIC3O95833 236 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 CSTBP04080 98 aaKnown RBP13.34□□□□□ -0.27
CPSF1-207ENST00000531727 ZNF93P35789 620 aaPredicted RBP13.34□□□□□ -0.27
CPSF1-207ENST00000531727 PPP3R1P63098 170 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 HES1Q14469 280 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 DDI2Q5TDH0 399 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 OR2G6Q5TZ20 316 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 TMPRSS11AQ6ZMR5 421 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 LINC00596Q86U02 117 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 C5orf56Q8N8D9 126 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 OR52N1Q8NH53 320 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 RDH12Q96NR8 316 aa13.34□□□□□ -0.27
CPSF1-207ENST00000531727 SMPD3Q9NY59 655 aaPredicted RBP13.34□□□□□ -0.27
CPSF1-207ENST00000531727 TMEM30CPA0ZSE6 113 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 GEMIN2O14893 280 aaKnown RBP13.33□□□□□ -0.28
CPSF1-207ENST00000531727 OGG1O15527 345 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 FGF16O43320 207 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 OR7C1O76099 320 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-207ENST00000531727 GZMHP20718 246 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 BDKRB2P30411 391 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 OR10X1Q8NGY0 326 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 SMIM19Q96E16 107 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 S100A13Q99584 98 aa13.33□□□□□ -0.28
CPSF1-207ENST00000531727 PAK1IP1Q9NWT1 392 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-207ENST00000531727 SIRT4Q9Y6E7 314 aaPredicted RBP13.33□□□□□ -0.28
CPSF1-207ENST00000531727 NOTCH3Q9UM47 2321 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 IRGMA1A4Y4 181 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 DUS4LO95620 317 aaKnown RBP13.32□□□□□ -0.28
CPSF1-207ENST00000531727 MPIG6BO95866 241 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 IGKV1D-33P01593 117 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 IGKV1-33P01594 117 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 SERPINA2P20848 420 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 ZNF816Q0VGE8 651 aaPredicted RBP13.32□□□□□ -0.28
CPSF1-207ENST00000531727 MPV17LQ2QL34 196 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 ZNF329Q86UD4 541 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 LINC00482Q8N8I6 264 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 OR13C5Q8NGS8 318 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 CHPT1Q8WUD6 406 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 BABAM2Q9NXR7 383 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 ZNF281Q9Y2X9 895 aa13.32□□□□□ -0.28
CPSF1-207ENST00000531727 A0A1W2PPE3 182 aa13.31□□□□□ -0.28
CPSF1-207ENST00000531727 HSD17B6O14756 317 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms