RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 GNRHR2Q96P88 292 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 TBL1YQ9BQ87 522 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 EFCAB11Q9BUY7 163 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 FAIM2Q9BWQ8 316 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 PECRQ9BY49 303 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ULBP3Q9BZM4 244 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 CTDSP1Q9GZU7 261 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 BANF2Q9H503 90 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ZMAT4Q9H898 229 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 BPIFA1Q9NP55 256 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 AMBNQ9NP70 447 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 GPR84Q9NQS5 396 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 LANCL2Q9NS86 450 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 STARD5Q9NSY2 213 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 OCIAD1Q9NX40 245 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF107Q9UII5 783 aaPredicted RBP6.52□□□□□ -1.37
HDAC3-216ENST00000523088 RARRES3Q9UL19 164 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 EXO1Q9UQ84 846 aaKnown RBP6.52□□□□□ -1.37
HDAC3-216ENST00000523088 LAMTOR2Q9Y2Q5 125 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 SEC16AO15027 2179 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 BSNQ9UPA5 3926 aa6.52□□□□□ -1.37
HDAC3-216ENST00000523088 A0A1B0GX51 115 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TMEM89A2RUT3 159 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR2M5A3KFT3 312 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 C7orf77A4D0Y5 90 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FAM90A8PA6NJQ4 464 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FAM166BA8MTA8 275 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 E7EQ34 232 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 H7BYZ3 331 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR1F1O43749 312 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FGF17O60258 216 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TIAF1O95411 115 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 PRB1P04280 392 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 KLK1P06870 262 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FAM90A13PP0C7W8 464 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FAM90A24PP0C7X0 464 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR12D1P0DN82 309 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 LAMP1P11279 417 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 ATP1B2P14415 290 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-216ENST00000523088 B4GALT1P15291 398 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 CD1DP15813 335 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TCN2P20062 427 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 CD33P20138 364 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 EVI2AP22794 236 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 NPY1RP25929 384 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 CD40P25942 277 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 PSMB4P28070 264 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FGF9P31371 208 aaPredicted RBP6.51□□□□□ -1.37
HDAC3-216ENST00000523088 IER3P46695 156 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 MARCKSL1P49006 195 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 INPP1P49441 399 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 NUDT2P50583 147 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR12D2P58182 307 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TAS2R20P59543 309 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 HIST1H3AP68431 136 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 ZNF345Q14585 488 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 PMVKQ15126 192 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 ATP6AP1LQ52LC2 224 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FAM69BQ5VUD6 431 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR2T2Q6IF00 324 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 LCN8Q6JVE9 175 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TRMT10BQ6PF06 316 aaKnown RBP6.51□□□□□ -1.37
HDAC3-216ENST00000523088 FAM180AQ6UWF9 173 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TEX43Q6ZNM6 134 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 ACVR1CQ8NER5 493 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 APOBEC4Q8WW27 367 aaKnown RBP6.51□□□□□ -1.37
HDAC3-216ENST00000523088 C1orf159Q96HA4 380 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 CCDC140Q96MF4 163 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TSSK2Q96PF2 358 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR6C1Q96RD1 312 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 IMMP2LQ96T52 175 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 MACROD1Q9BQ69 325 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 NDFIP1Q9BT67 221 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 HCAR1Q9BXC0 346 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 SPRY4Q9C004 299 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 LPAR5Q9H1C0 372 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 HINT3Q9NQE9 182 aaKnown RBP6.51□□□□□ -1.37
HDAC3-216ENST00000523088 TAS2R16Q9NYV7 291 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 OR1A1Q9P1Q5 309 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 UQCR10Q9UDW1 63 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 KCNE5Q9UJ90 142 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 RCE1Q9Y256 329 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 CFAP46Q8IYW2 2715 aa6.51□□□□□ -1.37
HDAC3-216ENST00000523088 BOD1L1Q8NFC6 3051 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 IGLV3-16A0A075B6K0 115 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 A0A0G2JMM0 328 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 CENPVL1A0A0U1RR11 272 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 A0A1W2PPB8 328 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 DHRS12A0PJE2 317 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
HDAC3-216ENST00000523088 MBD3L4A6NDZ8 208 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 MBD3L3A6NE82 208 aaPredicted RBP6.5□□□□□ -1.37
HDAC3-216ENST00000523088 SERINC4A6NH21 518 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms