RNA–Protein interactions for RNA: ENST00000514738.5

CDH6-205, Transcript of cadherin 6, humanhuman

TSL 1 (best) BASIC

Gene CDH6, Length 2,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-205ENST00000514738 RBM24Q9BX46 236 aaKnown RBP14.09□□□□□ -0.15
CDH6-205ENST00000514738 TRAPPC2LQ9UL33 140 aa14.09□□□□□ -0.15
CDH6-205ENST00000514738 DENND4CQ5VZ89 1909 aa14.09□□□□□ -0.15
CDH6-205ENST00000514738 SLC17A2O00624 439 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 HIST1H1AQ02539 215 aaPredicted RBP14.08□□□□□ -0.16
CDH6-205ENST00000514738 MEF2CQ06413 473 aaPredicted RBP14.08□□□□□ -0.16
CDH6-205ENST00000514738 C5orf47Q569G3 176 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 STUMQ69YW2 141 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 BRICD5Q6PL45 260 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 OR4N2Q8NGD1 307 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 P2RX4Q99571 388 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 PLEKHF2Q9H8W4 249 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 HSPB8Q9UJY1 196 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 C7orf71A4D174 169 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 TMEM189A5PLL7 270 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 LRRC3CA6NJW4 275 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 CLEC3AO75596 197 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 C3orf79P0CE67 100 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 IGLL1P15814 213 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 DNASE1L1P49184 302 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 PMCHL1Q16048 86 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.08□□□□□ -0.16
CDH6-205ENST00000514738 FNDC9Q8TBE3 224 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 GPER1Q99527 375 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 VN1R1Q9GZP7 353 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 ZDHHC11Q9H8X9 412 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 THAP10Q9P2Z0 257 aaPredicted RBP14.08□□□□□ -0.16
CDH6-205ENST00000514738 DOCK6Q96HP0 2047 aa14.08□□□□□ -0.16
CDH6-205ENST00000514738 NUP210LQ5VU65 1888 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 ANKRD30BLA7E2S9 258 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 SAP18O00422 153 aaKnown RBP14.07□□□□□ -0.16
CDH6-205ENST00000514738 CGAP01215 116 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 ZNF17P17021 662 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 GPM6AP51674 278 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 TMPRSS3P57727 454 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 ZNF684Q5T5D7 378 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 FAM78BQ5VT40 261 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 PERPQ96FX8 193 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 SERTAD4Q9NUC0 356 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 PLA2G3Q9NZ20 509 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 DOCK4Q8N1I0 1966 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 PSMB11A5LHX3 300 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 F2Z2F3 143 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 ADH4P08319 380 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 IGFBP7Q16270 282 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 TCF23Q7RTU1 214 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 RNF166Q96A37 237 aaPredicted RBP14.07□□□□□ -0.16
CDH6-205ENST00000514738 SCARF2Q96GP6 870 aaPredicted RBP14.07□□□□□ -0.16
CDH6-205ENST00000514738 AGMATQ9BSE5 352 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 DUSP23Q9BVJ7 150 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 JKAMPQ9P055 326 aa14.07□□□□□ -0.16
CDH6-205ENST00000514738 UBE2J1Q9Y385 318 aaPredicted RBP14.07□□□□□ -0.16
CDH6-205ENST00000514738 TRBV5-7A0A0A0MS05 114 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 DUXBA0A1W2PPF3 345 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 SIRPB1O00241 398 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 HS3ST1O14792 307 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 GATA2P23769 480 aaPredicted RBP14.06□□□□□ -0.16
CDH6-205ENST00000514738 ARTNQ5T4W7 220 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 OR4C11Q6IEV9 310 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 FBXL22Q6P050 247 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 GTF3C1Q12789 2109 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 NSG1A0A0A6YYJ2 146 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 H3BSH0 61 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 CMPK1P30085 196 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 NPBWR2P48146 333 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 MS4A13Q5J8X5 152 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 TP73-AS1Q9UF72 201 aa14.06□□□□□ -0.16
CDH6-205ENST00000514738 CCNL1Q9UK58 526 aaPredicted RBP14.06□□□□□ -0.16
CDH6-205ENST00000514738 SLC17A3O00476 420 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 XRCC2O43543 280 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 RAD51DO75771 328 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 CDKN3Q16667 212 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 AP1S3Q96PC3 154 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 NDFIP1Q9BT67 221 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 B3GALT1Q9Y5Z6 326 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 TAS2R50P59544 299 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 C6orf15Q6UXA7 325 aaPredicted RBP14.05□□□□□ -0.16
CDH6-205ENST00000514738 C1orf123Q9NWV4 160 aa14.05□□□□□ -0.16
CDH6-205ENST00000514738 TRAV1-1A0A0B4J248 108 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 ZNF133P52736 654 aaPredicted RBP14.04□□□□□ -0.16
CDH6-205ENST00000514738 AGERQ15109 404 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 FAM166AQ6J272 317 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 CDC42EP5Q6NZY7 148 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 CSNK1A1LQ8N752 337 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 NEU4Q8WWR8 484 aaPredicted RBP14.04□□□□□ -0.16
CDH6-205ENST00000514738 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
CDH6-205ENST00000514738 VPREB3Q9UKI3 123 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 MEGF11A6BM72 1044 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 DDTLA6NHG4 134 aaPredicted RBP14.04□□□□□ -0.16
CDH6-205ENST00000514738 CEACAM18A8MTB9 384 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 C17orf112F2Z3M2 114 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 WNT2P09544 360 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 SRD5A2P31213 254 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 ARF1P84077 181 aaKnown RBP14.04□□□□□ -0.16
CDH6-205ENST00000514738 LGI3Q8N145 548 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 OR2K2Q8NGT1 345 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 ZG16BQ96DA0 208 aa14.04□□□□□ -0.16
CDH6-205ENST00000514738 ATG10Q9H0Y0 220 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms