RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CENPWQ5EE01 88 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 LAMTOR1Q6IAA8 161 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 GOLT1AQ6ZVE7 132 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 LINC00337Q8N6G1 96 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 JOSD2Q8TAC2 188 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 MND1Q9BWT6 205 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 EBPLQ9BY08 206 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 POPDC3Q9HBV1 291 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 SLCO1B3Q9NPD5 702 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 KIF15Q9NS87 1388 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 G3V2T6 193 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 MPC1LP0DKB6 136 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 RPL34P49207 117 aaKnown RBP4.07□□□□□ -1.76
NIPBL-204ENST00000504430 HNRNPA3P51991 378 aaKnown RBP4.07□□□□□ -1.76
NIPBL-204ENST00000504430 NDUFV3P56181 108 aaKnown RBP4.07□□□□□ -1.76
NIPBL-204ENST00000504430 HIST1H3AP68431 136 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 H3F3AP84243 136 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 QPRTQ15274 297 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 RHEBQ15382 184 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 KCNJ8Q15842 424 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 MUC21Q5SSG8 566 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 FAM201AQ5SY85 155 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 ANKRD22Q5VYY1 191 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 HIST2H3AQ71DI3 136 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF550Q7Z398 422 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 C9orf40Q8IXQ3 194 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 SLC35G3Q8N808 338 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 MED11Q9P086 117 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 LOC100130705A0A1B0GUX0 176 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 H3BSA7 217 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 AK4P27144 223 aaPredicted RBP4.07□□□□□ -1.76
NIPBL-204ENST00000504430 INCA1Q0VD86 236 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 DHRS2Q13268 280 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 OR10J6PQ8NGY7 276 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 TMEM101Q96IK0 257 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 SLC35G5Q96KT7 338 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 SLC23A2Q9UGH3 650 aa4.07□□□□□ -1.76
NIPBL-204ENST00000504430 H0Y9J4 135 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 SAP18O00422 153 aaKnown RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 PDCD6O75340 191 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 NXPH4O95158 308 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 SDC4P31431 198 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 PHBP35232 272 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 KLF3P57682 345 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 RNF165Q6ZSG1 346 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 ZFAND1Q8TCF1 268 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 KCTD14Q9BQ13 255 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 C20orf27Q9GZN8 174 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 PCYOX1Q9UHG3 505 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF608Q9ULD9 1512 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 PTPRKQ15262 1439 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 TRIP12Q14669 1992 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 TRAPPC13A5PLN9 417 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 EPOPA6NHQ4 379 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 RPL37AP8A6NKH3 93 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 NDUFS5O43920 106 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF682O95780 498 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 RCC1P18754 421 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 MYL12AP19105 171 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 EVX1P49640 407 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 STPG1Q5TH74 334 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 MORN5Q5VZ52 161 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 TEX36Q5VZQ5 186 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 DCAF4L2Q8NA75 395 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 FAM3DQ96BQ1 224 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 PDXPQ96GD0 296 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 SLC25A44Q96H78 314 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 TCEAL7Q9BRU2 100 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 TMEM147Q9BVK8 224 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF436Q9C0F3 470 aaPredicted RBP4.06□□□□□ -1.76
NIPBL-204ENST00000504430 PYCARDQ9ULZ3 195 aa4.06□□□□□ -1.76
NIPBL-204ENST00000504430 C5orf63A6NC05 138 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 PAX4O43316 350 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 RENP00797 406 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 IFNA10P01566 189 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 CHRNB4P30926 498 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 LINC01547P58512 204 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DAZ2Q13117 558 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 CLEC12BQ2HXU8 276 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 NCMAPQ5T1S8 102 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DAZ4Q86SG3 579 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 ZNF433Q8N7K0 673 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 OR4K15Q8NH41 348 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 ZFP90Q8TF47 636 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 PITX2Q99697 317 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 NDFIP1Q9BT67 221 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 EXOSC3Q9NQT5 275 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DAZ1Q9NQZ3 744 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 DAZ3Q9NR90 486 aaKnown RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 SIGLEC7Q9Y286 467 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 NAV1Q8NEY1 1877 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 TRAV8-2A0A0B4J237 113 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 A0A0U1RQV1 116 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 SLC22A1O15245 554 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 LYPLA1O75608 230 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-204ENST00000504430 CTLA4P16410 223 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 ARL9Q6T311 187 aa4.05□□□□□ -1.76
NIPBL-204ENST00000504430 CXCL17Q6UXB2 119 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms