RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	RTN4RL2	Q86UN3	420 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	IZUMO1	Q8IYV9	350 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	BPIFB2	Q8N4F0	458 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	ZDHHC22	Q8N966	263 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR4M1	Q8NGD0	313 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR8B3	Q8NGG8	313 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	RAB3C	Q96E17	227 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	NEIL1	Q96FI4	390 aa	Predicted RBP	10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	ARHGAP5-AS1	Q96IT6	56 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	SNX22	Q96L94	193 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR8B2	Q96RD0	313 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	DPCD	Q9BVM2	203 aa	Predicted RBP	10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	PPA2	Q9H2U2	334 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	IFT22	Q9H7X7	185 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	PLEKHJ1	Q9NW61	149 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	KAAG1	Q9UBP8	84 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	EXTL2	Q9UBQ6	330 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	CTSZ	Q9UBR2	303 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	AUP1	Q9Y679	476 aa		10.8	□□□□□ -0.68
NR1H3-223	ENST00000486991	TRAV18	A0A075B6X5	111 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	UBE2QL1	A1L167	161 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	MCRIP1	C9JLW8	97 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	RAB27B	O00194	218 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	DVL1	O14640	695 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	PSPN	O60542	156 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	ZNF737	O75373	536 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	WNT2	P09544	360 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	NDUFB7	P17568	137 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	LMO1	P25800	156 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	TNFSF8	P32971	234 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	TALDO1	P37837	337 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR3A1	P47881	315 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	TMEM50B	P56557	158 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	GRK1	Q15835	563 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	TUSC1	Q2TAM9	212 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	AWAT1	Q58HT5	328 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	LRRC10	Q5BKY1	277 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	CNIH2	Q6PI25	160 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	RBMS3	Q6XE24	437 aa	Known RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	C17orf107	Q6ZR85	190 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	FGFRL1	Q8N441	504 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR4S1	Q8NGB4	309 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	PPP1R35	Q8TAP8	253 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	ST8SIA4	Q92187	359 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	DIRAS2	Q96HU8	199 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	CYYR1	Q96J86	154 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	DUX5	Q96PT3	197 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	FAAP24	Q9BTP7	215 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	PECR	Q9BY49	303 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	ZMAT3	Q9HA38	289 aa	Known RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	MMP26	Q9NRE1	261 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	ING3	Q9NXR8	418 aa		10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	RCC2	Q9P258	522 aa	Known RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	SLC25A10	Q9UBX3	287 aa	Predicted RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991	MRPS7	Q9Y2R9	242 aa	Known RBP	10.79	□□□□□ -0.68
NR1H3-223	ENST00000486991		A0A0A6YYH2	397 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991		A6NJ64	397 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991		K7N7A8	449 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	XRCC3	O43542	346 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	TK1	P04183	234 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	HIST1H1D	P16402	221 aa	Known RBP	10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	GNB3	P16520	340 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	GNB2	P62879	340 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	RBM39	Q14498	530 aa	Known RBP	10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	EDDM3A	Q14507	147 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	CDNF	Q49AH0	187 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	PLAC9	Q5JTB6	97 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	TMEM69	Q5SWH9	247 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	GDPD3	Q7L5L3	318 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR8H2	Q8N162	312 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	OR6Q1	Q8NGQ2	317 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	DYRK2	Q92630	601 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	TAF15	Q92804	592 aa	Known RBP eCLIP	10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	SULT4A1	Q9BR01	284 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	ETAA1	Q9NY74	926 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	CLN8	Q9UBY8	286 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	HSF4	Q9ULV5	492 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	INSIG2	Q9Y5U4	225 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	TG	P01266	2768 aa		10.78	□□□□□ -0.68
NR1H3-223	ENST00000486991	MGST3	O14880	152 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	FCN3	O75636	299 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	GLA	P06280	429 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	MNDA	P41218	407 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	NPY4R	P50391	375 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	EDDM3B	P56851	147 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	TAS2R20	P59543	309 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	OLFML2A	Q68BL7	652 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	ZNF841	Q6ZN19	808 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	OR5D13	Q8NGL4	314 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	SGMS2	Q8NHU3	365 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	PLPPR1	Q8TBJ4	325 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	H1FX	Q92522	213 aa	Known RBP	10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	WDFY2	Q96P53	400 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	NUDT16L1	Q9BRJ7	211 aa	Known RBP	10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	FAM234A	Q9H0X4	552 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	AK3	Q9UIJ7	227 aa		10.77	□□□□□ -0.69
NR1H3-223	ENST00000486991	MFNG	O00587	321 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms