RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 UPK1BO75841 260 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 CLIC3O95833 236 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 OXTP01178 125 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 IGFBP3P17936 291 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 SRD5A1P18405 259 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 RCC1P18754 421 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 HOXD3P31249 432 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 RPL27P61353 136 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 HSPE1P61604 102 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 FKBP3Q00688 224 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 RUNX3Q13761 415 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 HERPUD1Q15011 391 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 IZUMO4Q1ZYL8 232 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 SLC25A35Q3KQZ1 300 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 SYTL3Q4VX76 610 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF343Q6P1L6 599 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF720Q7Z2F6 126 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 B3GALNT2Q8NCR0 500 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 OR1N2Q8NGR9 330 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 RXFP4Q8TDU9 374 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF689Q96CS4 500 aaPredicted RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 RNF157Q96PX1 679 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 MRPL57Q9BQC6 102 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 C20orf27Q9GZN8 174 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 POPDC3Q9HBV1 291 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 GPR84Q9NQS5 396 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 TECRQ9NZ01 308 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 NAT8BQ9UHF3 227 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 NUDT5Q9UKK9 219 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 CES1P1Q9UKY3 287 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 POMT2Q9UKY4 750 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 MCTS1Q9ULC4 181 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 PPP2R2CQ9Y2T4 447 aa5.17□□□□□ -1.58
SMARCE1-208ENST00000474246 RTTNQ86VV8 2226 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CSPG4Q6UVK1 2322 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 MYH13Q9UKX3 1938 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 A0A0G2JLM5 398 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 A0A0U1RQF3 1178 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 TMEM202A6NGA9 273 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CEACAM18A8MTB9 384 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 PDCD5O14737 125 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 FABP7O15540 132 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 SPRY2O43597 315 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ICOSLGO75144 302 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 GCGP01275 180 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CT45A6P0DMU7 189 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CT45A5P0DMU8 189 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CT45A7P0DMV0 189 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 VSIG10L2P0DP72 767 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 RPL35AP18077 110 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CHATP28329 748 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 GZMMP51124 257 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 HCCSP53701 268 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ARPP19P56211 112 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 GNG11P61952 73 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 P2RY6Q15077 328 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ELAVL1Q15717 326 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 SSX1Q16384 188 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF284Q2VY69 593 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF542PQ5EBM4 170 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CT45A1Q5HYN5 189 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 PLPP4Q5VZY2 271 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 FAM231DQ6ZW35 169 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF534Q76KX8 674 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 C5orf24Q7Z6I8 188 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 BCL6BQ8N143 479 aaPredicted RBP5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 GPD1LQ8N335 351 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 OR2K2Q8NGT1 345 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 OR51Q1Q8NH59 317 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 CT45A3Q8NHU0 189 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 MALSU1Q96EH3 234 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 SMIM3Q9BZL3 60 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 NANOGQ9H9S0 305 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 HRASLS2Q9NWW9 162 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 NAT8Q9UHE5 227 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 HS3ST2Q9Y278 367 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 TMED3Q9Y3Q3 217 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF780BQ9Y6R6 833 aa5.16□□□□□ -1.58
SMARCE1-208ENST00000474246 ZAR1LA6NP61 321 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 FAM157AC9JC47 383 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 RPL36A-HNRNPH2H7BZ11 118 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 PHOX2AO14813 284 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 KLF8O95600 359 aaPredicted RBP5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 FSTP19883 344 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 EVI2AP22794 236 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 RPA3P35244 121 aaPredicted RBP5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 EMDP50402 254 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 HIST1H1AQ02539 215 aaPredicted RBP5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 OR1C1Q15619 314 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 KDM4DQ6B0I6 523 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 SFXN4Q6P4A7 337 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 TNFAIP8L2Q6P589 184 aaPredicted RBP5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 ZNF66Q6ZN08 573 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 FAM183BPQ6ZVS7 135 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 C1QL4Q86Z23 238 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 PGBD5Q8N414 524 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 OR4S1Q8NGB4 309 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 OR1S2Q8NGQ3 325 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 RND1Q92730 232 aa5.15□□□□□ -1.58
SMARCE1-208ENST00000474246 GPR146Q96CH1 333 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms