RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FAM90A8PA6NJQ4 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A7PA6NKC0 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A22PA8MWA6 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A12PA8MX19 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A5PA8MXJ8 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A23PA8MXZ1 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 H3BUX3 64 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 IL1AP01583 271 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A15PP0C7V4 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A13PP0C7W8 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A14PP0C7W9 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A24PP0C7X0 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 CALRP27797 417 aaKnown RBP10.46□□□□□ -0.73
COL5A1-206ENST00000465877 HTR2CP28335 458 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 SSTR5P35346 364 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FOXL1Q12952 345 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 DYNC1I2Q13409 638 aaKnown RBP10.46□□□□□ -0.73
COL5A1-206ENST00000465877 C17orf58Q2M2W7 97 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 C1orf100Q5SVJ3 147 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 LDLRAD2Q5SZI1 272 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 UBE2UQ5VVX9 321 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 OR52W1Q6IF63 320 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 GDPGP1Q6ZNW5 385 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 SPARTQ8N0X7 666 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 OR6M1Q8NGM8 313 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 GFI1Q99684 422 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 SSX3Q99909 188 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 NCOR1P1Q9H4R4 102 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 ZNF286AQ9HBT8 521 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 CALYQ9NYX4 217 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 KBTBD11-OT1A0A1B0GTJ5 212 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 HAX1O00165 279 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 CCRL2O00421 344 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 SLC22A1O15245 554 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 MPIG6BO95866 241 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 CRYBA1P05813 215 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 MDKP21741 143 aaPredicted RBP10.45□□□□□ -0.74
COL5A1-206ENST00000465877 PSMB9P28065 219 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 CD34P28906 385 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 RAG2P55895 527 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 RELBQ01201 579 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 AANATQ16613 207 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 PLA1AQ53H76 456 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 DHRS7BQ6IAN0 325 aaPredicted RBP10.45□□□□□ -0.74
COL5A1-206ENST00000465877 SLC35E4Q6ICL7 350 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 OR10K2Q6IF99 312 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 RAB12Q6IQ22 244 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 ZNF773Q6PK81 442 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 DYNAPQ8N1N2 210 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 OR4P4Q8NGL7 312 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 FCGR1BQ92637 280 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 KIRREL1Q96J84 757 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 TMEM59Q9BXS4 323 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 YTHDF1Q9BYJ9 559 aaKnown RBP10.45□□□□□ -0.74
COL5A1-206ENST00000465877 MEGF9Q9H1U4 602 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 PLGRKTQ9HBL7 147 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 C1RLQ9NZP8 487 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 AK6Q9Y3D8 172 aaKnown RBP10.45□□□□□ -0.74
COL5A1-206ENST00000465877 FBN3Q75N90 2809 aa10.45□□□□□ -0.74
COL5A1-206ENST00000465877 A0A087X0M5 115 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 A0A1B0GX30 115 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 SLC17A2O00624 439 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 NDUFA7O95182 113 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 BPNT1O95861 308 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 VSIG8P0DPA2 414 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 CFPP27918 469 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 UNC119Q13432 240 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 RBM39Q14498 530 aaKnown RBP10.44□□□□□ -0.74
COL5A1-206ENST00000465877 KCTD21Q4G0X4 260 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 MINOS1Q5TGZ0 78 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 SIGIRRQ6IA17 410 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 BRICD5Q6PL45 260 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 CD200R1LQ6Q8B3 271 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 ZNF497Q6ZNH5 498 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 RTN4RL2Q86UN3 420 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 C3orf56Q8N813 242 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 ZNF565Q8N9K5 539 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 NDNFQ8TB73 568 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 CYYR1Q96J86 154 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 MINOS1-NBL1R4GNA1 71 aa10.44□□□□□ -0.74
COL5A1-206ENST00000465877 TRAV39A0A0B4J263 110 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 VGLL3A8MV65 326 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 TMEM14DPA8MWL7 114 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 MCRIP1C9JLW8 97 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 NPIPB11E5RHQ5 1161 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 AIPO00170 330 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 PDCD6O75340 191 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 IGLV1-47P01700 117 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 CGB3P0DN86 165 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 CGB7P0DN87 165 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 CD37P11049 281 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 MYL9P24844 172 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 NFYBP25208 207 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 RPS27AP62979 156 aaKnown RBP10.43□□□□□ -0.74
COL5A1-206ENST00000465877 FAM189A2Q15884 450 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 SSX2Q16385 188 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 LY6EQ16553 131 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 NKAPLQ5M9Q1 402 aa10.43□□□□□ -0.74
COL5A1-206ENST00000465877 ABHD12Q8N2K0 398 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms