RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	CALY	Q9NYX4	217 aa		12.32	□□□□□ -0.44
SNU13-205	ENST00000463675	OR6C3	Q9NZP0	311 aa		12.32	□□□□□ -0.44
SNU13-205	ENST00000463675	VPREB3	Q9UKI3	123 aa		12.32	□□□□□ -0.44
SNU13-205	ENST00000463675	POMT1	Q9Y6A1	747 aa		12.32	□□□□□ -0.44
SNU13-205	ENST00000463675	TMEM30CP	A0ZSE6	113 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	IGHV3-7	P01780	117 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	VSIG8	P0DPA2	414 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	HTR2C	P28335	458 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	CLDN12	P56749	244 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	NEDD8	Q15843	81 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	LRRC75B	Q2VPJ9	315 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	NKAPL	Q5M9Q1	402 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	C1orf100	Q5SVJ3	147 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	RAB12	Q6IQ22	244 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	HEPN1	Q6WQI6	88 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	RTN4RL2	Q86UN3	420 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	OR11H6	Q8NGC7	330 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	NDNF	Q8TB73	568 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	CCDC107	Q8WV48	283 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	CORO2A	Q92828	525 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	LEAP2	Q969E1	77 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	BARHL1	Q9BZE3	327 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	CST11	Q9H112	138 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	DPAGT1	Q9H3H5	408 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	TAS2R3	Q9NYW6	316 aa		12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	RCC2	Q9P258	522 aa	Known RBP	12.31	□□□□□ -0.44
SNU13-205	ENST00000463675	KBTBD11-OT1	A0A1B0GTJ5	212 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	SHISA3	A0PJX4	238 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	SMIM30	A4D0T7	59 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	ZNF729	A6NN14	1252 aa	Predicted RBP	12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	SLC22A1	O15245	554 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	MRPS14	O60783	128 aa	Known RBP	12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	IL1A	P01583	271 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	MDK	P21741	143 aa	Predicted RBP	12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	KCNJ3	P48549	501 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	OR10A3	P58181	314 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	RELB	Q01201	579 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	UNC119	Q13432	240 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	FAM189A2	Q15884	450 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	SSX2	Q16385	188 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	SIGIRR	Q6IA17	410 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	OR6M1	Q8NGM8	313 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	RFESD	Q8TAC1	157 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	KIRREL1	Q96J84	757 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	SSX3	Q99909	188 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	NICN1	Q9BSH3	213 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	TMEM59	Q9BXS4	323 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	HILPDA	Q9Y5L2	63 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	PEX16	Q9Y5Y5	336 aa		12.3	□□□□□ -0.44
SNU13-205	ENST00000463675	UBE2QL1	A1L167	161 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	HAX1	O00165	279 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	AIP	O00170	330 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	CCRL2	O00421	344 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	CRYBA1	P05813	215 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	UBB	P0CG47	229 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	GNG10	P50151	68 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	RAG2	P55895	527 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	RBM39	Q14498	530 aa	Known RBP	12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	RAB11B	Q15907	218 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	KCTD21	Q4G0X4	260 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	HES5	Q5TA89	166 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	C22orf42	Q6IC83	251 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	ABHD12	Q8N2K0	398 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	OR4P4	Q8NGL7	312 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	FCGR1B	Q92637	280 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	MRPS24	Q96EL2	167 aa	Known RBP	12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	YTHDF1	Q9BYJ9	559 aa	Known RBP	12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	SPACA1	Q9HBV2	294 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	ETAA1	Q9NY74	926 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	C1RL	Q9NZP8	487 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	TBL2	Q9Y4P3	447 aa	Known RBP	12.29	□□□□□ -0.44
SNU13-205	ENST00000463675	LRRC42	Q9Y546	428 aa		12.29	□□□□□ -0.44
SNU13-205	ENST00000463675		A0A0A6YYD4	124 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	FAM90A8P	A6NJQ4	464 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	MCRIP1	C9JLW8	97 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	SLC17A2	O00624	439 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	PDCD6	O75340	191 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	BPNT1	O95861	308 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	MYL9	P24844	172 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	COMP	P49747	757 aa	Predicted RBP	12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	RAB13	P51153	203 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	RPS27A	P62979	156 aa	Known RBP	12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	PAX5	Q02548	391 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	SLC35E4	Q6ICL7	350 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	CD200R1L	Q6Q8B3	271 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	ZNF497	Q6ZNH5	498 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	C3orf56	Q8N813	242 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	OR4K15	Q8NH41	348 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	OR5R1	Q8NH85	324 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	IDI2-AS1	Q9NZ38	188 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675	GHRL	Q9UBU3	117 aa		12.28	□□□□□ -0.44
SNU13-205	ENST00000463675		A0A0B4J203	849 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	TRDV1	A0A1B0GX56	115 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	CHST1	O43916	411 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	CGB3	P0DN86	165 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	CGB7	P0DN87	165 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	CFP	P27918	469 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	QRFP	P83859	136 aa		12.27	□□□□□ -0.45
SNU13-205	ENST00000463675	FOXL1	Q12952	345 aa		12.27	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms