RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 MYRFQ9Y2G1 1151 aa13.56□□□□□ -0.24
HMGN1-209ENST00000463631 SIRT4Q9Y6E7 314 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-209ENST00000463631 SORL1Q92673 2214 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 H0YJX3 145 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 IGHV3-7P01780 117 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 ELANEP08246 267 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 KCNJ3P48549 501 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 GPR50Q13585 617 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 PAN3Q58A45 887 aaKnown RBP13.55□□□□□ -0.24
HMGN1-209ENST00000463631 OR51A4Q8NGJ6 313 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 OR10X1Q8NGY0 326 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 OR10AC1Q8NH08 325 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 EME1Q96AY2 570 aa13.55□□□□□ -0.24
HMGN1-209ENST00000463631 ZNF256Q9Y2P7 627 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-209ENST00000463631 HUWE1Q7Z6Z7 4374 aaKnown RBP13.55□□□□□ -0.24
HMGN1-209ENST00000463631 RYR2Q92736 4967 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 TRAV24A0A0B4J272 114 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 IGHV1-3A0A0C4DH29 117 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 SEC14L6B5MCN3 397 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 CCRL2O00421 344 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 SLC16A6O15403 523 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 ECI1P42126 302 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 GNG10P50151 68 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 CFHR3Q02985 330 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 KISS1Q15726 138 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 CASC10Q5T4H9 136 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 RSBN1Q5VWQ0 802 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-209ENST00000463631 ZDHHC13Q8IUH4 622 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 OR13C3Q8NGS6 347 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 CNIH3Q8TBE1 160 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 C4orf3Q8WVX3 66 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-209ENST00000463631 CIB1Q99828 191 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 GABARAPL3Q9BY60 117 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 BARHL1Q9BZE3 327 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 ZCCHC4Q9H5U6 513 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 ZNF580Q9UK33 172 aa13.54□□□□□ -0.24
HMGN1-209ENST00000463631 OR4C45A6NMZ5 311 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 J3QRE1 110 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 HSPB6O14558 160 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 MPZL2O60487 215 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 GAPDHP04406 335 aaKnown RBP13.53□□□□□ -0.24
HMGN1-209ENST00000463631 TMEM225BP0DP42 221 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 SSTR5P35346 364 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 IL13RA2Q14627 380 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 LCNL1Q6ZST4 164 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 PXT1Q8NFP0 134 aa13.53□□□□□ -0.24
HMGN1-209ENST00000463631 GYG2O15488 501 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 SULT1B1O43704 296 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 RRP9O43818 475 aaKnown RBP13.52□□□□□ -0.25
HMGN1-209ENST00000463631 IGHG4P01861 327 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 HTR1AP08908 422 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 LINC00311Q8N616 119 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 C8orf31Q8N9H6 132 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 Q8N9W7 124 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 TMEM104Q8NE00 496 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 Q8NFD4 153 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 OR2T10Q8NGZ9 312 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 RFESDQ8TAC1 157 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 MYOZ3Q8TDC0 251 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 MRGPRDQ8TDS7 321 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 ASCL2Q99929 193 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 PLSCR3Q9NRY6 295 aa13.52□□□□□ -0.25
HMGN1-209ENST00000463631 NCBP2LA6PVI3 153 aaKnown RBP13.51□□□□□ -0.25
HMGN1-209ENST00000463631 HCKP08631 526 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
HMGN1-209ENST00000463631 INSL3P51460 131 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 ZNF691Q5VV52 312 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 MOB3BQ86TA1 216 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 PARP16Q8N5Y8 322 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 OR8H1Q8NGG4 311 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 PELI1Q96FA3 418 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 CPNE2Q96FN4 548 aaPredicted RBP13.51□□□□□ -0.25
HMGN1-209ENST00000463631 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
HMGN1-209ENST00000463631 RPSAP08865 295 aaKnown RBP13.5□□□□□ -0.25
HMGN1-209ENST00000463631 PSMB8P28062 276 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 LTC4SQ16873 150 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 SERPINA12Q8IW75 414 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 FAM71E2Q8N5Q1 922 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 OR52M1Q8NGK5 317 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 OR5D14Q8NGL3 314 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 IFT22Q9H7X7 185 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 SACSQ9NZJ4 4579 aa13.5□□□□□ -0.25
HMGN1-209ENST00000463631 IGHV3-72A0A0B4J1Y9 119 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 A0A1W2PPE3 182 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 DAPL1A0PJW8 107 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 IGF1P05019 195 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 FASP25445 335 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 CD1BP29016 333 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 REG1BP48304 166 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 ALKBH1Q13686 389 aaKnown RBP13.49□□□□□ -0.25
HMGN1-209ENST00000463631 ZSCAN26Q16670 478 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 ZNF260Q3ZCT1 412 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 Q3ZCU0 254 aa13.49□□□□□ -0.25
HMGN1-209ENST00000463631 SLC25A30Q5SVS4 291 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms