RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 CREB3L1Q96BA8 519 aa15.18■□□□□ 0.02
COL5A1-203ENST00000460264 DPCDQ9BVM2 203 aaPredicted RBP15.18■□□□□ 0.02
COL5A1-203ENST00000460264 PRSS22Q9GZN4 317 aa15.18■□□□□ 0.02
COL5A1-203ENST00000460264 LINC00574Q9H8X3 128 aa15.18■□□□□ 0.02
COL5A1-203ENST00000460264 FKBP14Q9NWM8 211 aa15.18■□□□□ 0.02
COL5A1-203ENST00000460264 LY6LH3BQJ8 138 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 BUB1B-PAK6H3BSN5 160 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 GEMIN2O14893 280 aaKnown RBP15.17■□□□□ 0.02
COL5A1-203ENST00000460264 IL1AP01583 271 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 CEACAM3P40198 252 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 WNT4P56705 351 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 DEFA6Q01524 100 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 SLC22A6Q4U2R8 563 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 TPTE2P1Q5T6R2 138 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 Q6ZS46 218 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 LINC00596Q86U02 117 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 FAM110DQ8TAY7 271 aaPredicted RBP15.17■□□□□ 0.02
COL5A1-203ENST00000460264 MRGPRDQ8TDS7 321 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 S100A13Q99584 98 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 DCLRE1BQ9H816 532 aa15.17■□□□□ 0.02
COL5A1-203ENST00000460264 A0A1W2PP11 408 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 A0A1W2PPK0 400 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 ZNF780AO75290 641 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-203ENST00000460264 CELP19835 753 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 CD24P25063 80 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 BRS3P32247 399 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 SSTR5P35346 364 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 ARHGDIBP52566 201 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 PRRX1P54821 245 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 BLCAPP62952 87 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 RBM39Q14498 530 aaKnown RBP15.16■□□□□ 0.02
COL5A1-203ENST00000460264 MPV17LQ2QL34 196 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 FBLN7Q53RD9 439 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 OR9G1Q8NH87 305 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 WIPF2Q8TF74 440 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-203ENST00000460264 DERL3Q96Q80 235 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 MMP28Q9H239 520 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 IDI2-AS1Q9NZ38 188 aa15.16■□□□□ 0.02
COL5A1-203ENST00000460264 NKX1-2Q9UD57 310 aaPredicted RBP15.16■□□□□ 0.02
COL5A1-203ENST00000460264 TRAV39A0A0B4J263 110 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 NPIPB11E5RHQ5 1161 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 CD1AP06126 327 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 GTF2F2P13984 249 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 TMEM95Q3KNT9 176 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 CCDC144NLQ6NUI1 221 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 C16orf82Q7Z2V1 217 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 JAGN1Q8N5M9 183 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 NANOGP1Q8N7R0 232 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 LEAP2Q969E1 77 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 MUL1Q969V5 352 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 WNT10AQ9GZT5 417 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 LIN7BQ9HAP6 207 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 PCDHB16Q9NRJ7 776 aa15.15■□□□□ 0.02
COL5A1-203ENST00000460264 TMEM30CPA0ZSE6 113 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 OOSP1A8MZH6 123 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 H3BUI4 141 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 FBXO24O75426 580 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 IGHV3-7P01780 117 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 GPR176Q14439 515 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 ARSJQ5FYB0 599 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-203ENST00000460264 RFESDQ8TAC1 157 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 OR5M11Q96RB7 305 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 ERGIC3Q9Y282 383 aa15.14■□□□□ 0.01
COL5A1-203ENST00000460264 MRPS28Q9Y2Q9 187 aaKnown RBP15.14■□□□□ 0.01
COL5A1-203ENST00000460264 AMMECR1Q9Y4X0 333 aaPredicted RBP15.14■□□□□ 0.01
COL5A1-203ENST00000460264 J3QR06 171 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 PIN1P1O15428 100 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 CD28P10747 220 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 VDAC2P45880 294 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-203ENST00000460264 LTC4SQ16873 150 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 ATAD3CQ5T2N8 411 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 OR10A7Q8NGE5 316 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 THRSPQ92748 146 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 TOMM40LQ969M1 308 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 AKR1E2Q96JD6 320 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 SLC25A33Q9BSK2 321 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 PSG11Q9UQ72 335 aa15.13■□□□□ 0.01
COL5A1-203ENST00000460264 PEX14O75381 377 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 OR2F2O95006 317 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 MAS1P04201 325 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 CDK1P06493 297 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 MAPK3P27361 379 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-203ENST00000460264 MNDAP41218 407 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 PDLIM3Q53GG5 364 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-203ENST00000460264 RNLSQ5VYX0 342 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 AWAT2Q6E213 333 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 GLIPR1L1Q6UWM5 242 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 LYPD6Q86Y78 171 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 CDH26Q8IXH8 852 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 NEK7Q8TDX7 302 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 NRG4Q8WWG1 115 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 RPEQ96AT9 228 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 MRPS24Q96EL2 167 aaKnown RBP15.12■□□□□ 0.01
COL5A1-203ENST00000460264 RBM14Q96PK6 669 aaKnown RBP15.12■□□□□ 0.01
COL5A1-203ENST00000460264 OCSTAMPQ9BR26 566 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 MND1Q9BWT6 205 aa15.12■□□□□ 0.01
COL5A1-203ENST00000460264 RCC2Q9P258 522 aaKnown RBP15.12■□□□□ 0.01
COL5A1-203ENST00000460264 PLXNB1O43157 2135 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 GNG10P50151 68 aa15.11■□□□□ 0.01
COL5A1-203ENST00000460264 AQP4P55087 323 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms