RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 HMGN3Q15651 99 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 TSC22D1Q15714 1073 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 CMTM1Q8IZ96 169 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 OR2C3Q8N628 320 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 SUMF2Q8NBJ7 301 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 OR1K1Q8NGR3 316 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 IL17BQ9UHF5 180 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 PRELID3BQ9Y3B1 194 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 DNAJC13O75165 2243 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 ZNF407Q9C0G0 2248 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 CD46P15529 392 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 NOVA1P51513 510 aaKnown RBP17.16■□□□□ 0.34
CSPG5-203ENST00000456150 IL24Q13007 206 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 MIDNQ504T8 468 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 PKIBQ9C010 78 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 C11orf1Q9H5F2 150 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 PRSS50Q9UI38 385 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 KPTNQ9Y664 436 aa17.16■□□□□ 0.34
CSPG5-203ENST00000456150 FAM157AC9JC47 383 aa17.15■□□□□ 0.34
CSPG5-203ENST00000456150 UCP1P25874 307 aa17.15■□□□□ 0.34
CSPG5-203ENST00000456150 SNCAP37840 140 aa17.15■□□□□ 0.34
CSPG5-203ENST00000456150 WNT5AP41221 380 aa17.15■□□□□ 0.34
CSPG5-203ENST00000456150 ZNF616Q08AN1 781 aa17.15■□□□□ 0.34
CSPG5-203ENST00000456150 ASCL5Q7RTU5 278 aa17.15■□□□□ 0.34
CSPG5-203ENST00000456150 ZFP62Q8NB50 900 aaPredicted RBP17.15■□□□□ 0.34
CSPG5-203ENST00000456150 IGKV1D-13A0A0B4J2D9 117 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 IGKV1-13P0DP09 117 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 S100GP29377 79 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 ZNF266Q14584 549 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 PEA15Q15121 130 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 MRPL30Q8TCC3 161 aaKnown RBP17.14■□□□□ 0.33
CSPG5-203ENST00000456150 SLC25A31Q9H0C2 315 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 C12orf49Q9H741 205 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 C19orf12Q9NSK7 152 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 CACFD1Q9UGQ2 172 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 MLXQ9UH92 298 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 PIGBOS1A0A0B4J2F0 54 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 CLEC18AA5D8T8 446 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 IL18BPO95998 194 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 PRH1P02810 166 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 UCP2P55851 309 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 HIKESHIQ53FT3 197 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 FBXW9Q5XUX1 488 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 FAM58AQ8N1B3 248 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 CLEC18CQ8NCF0 446 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 BCL2L2Q92843 193 aaPredicted RBP17.14■□□□□ 0.33
CSPG5-203ENST00000456150 IL22RA2Q969J5 263 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 PARP12Q9H0J9 701 aaKnown RBP17.14■□□□□ 0.33
CSPG5-203ENST00000456150 LIPGQ9Y5X9 500 aa17.14■□□□□ 0.33
CSPG5-203ENST00000456150 MED13Q9UHV7 2174 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 IGKV1-6A0A0C4DH72 117 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 HSD17B6O14756 317 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 VDAC1P21796 283 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 VAMP2P63027 116 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 OR5D13Q8NGL4 314 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 PLEKHF2Q9H8W4 249 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 GP6Q9HCN6 339 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 CCL28Q9NRJ3 127 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 LHX6Q9UPM6 363 aa17.13■□□□□ 0.33
CSPG5-203ENST00000456150 ZFHX2Q9C0A1 2572 aaPredicted RBP17.13■□□□□ 0.33
CSPG5-203ENST00000456150 C9JQL5 133 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 H0Y980 276 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 ADAM20O43506 726 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 PITX3O75364 302 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 MMP9P14780 707 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 C5orf24Q7Z6I8 188 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.12■□□□□ 0.33
CSPG5-203ENST00000456150 HSD17B11Q8NBQ5 300 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 IFT22Q9H7X7 185 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 ZNF292O60281 2723 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 FAM24AA6NFZ4 105 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 J3QT63 122 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 J3QW42 95 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 POLR2GP62487 172 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSPG5-203ENST00000456150 HLA-DRB3P79483 266 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 GUK1Q16774 197 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 NMSQ5H8A3 153 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 ZNF880Q6PDB4 577 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 MDP1Q86V88 176 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 IL22RA1Q8N6P7 574 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 LILRB1Q8NHL6 650 aaPredicted RBP17.12■□□□□ 0.33
CSPG5-203ENST00000456150 WDYHV1Q96HA8 205 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 AKR1E2Q96JD6 320 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 ZNF488Q96MN9 340 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 SH3BGRL3Q9H299 93 aa17.12■□□□□ 0.33
CSPG5-203ENST00000456150 LYRM2Q9NU23 88 aaPredicted RBP17.12■□□□□ 0.33
CSPG5-203ENST00000456150 TRAV24A0A0B4J272 114 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 HS3ST1O14792 307 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 LILRA1O75019 489 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 TBC1D28Q2M2D7 210 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 PCSK4Q6UW60 755 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 OR10Z1Q8NGY1 313 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 OR10J5Q8NHC4 309 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 SNIP1Q8TAD8 396 aaKnown RBP17.11■□□□□ 0.33
CSPG5-203ENST00000456150 RDH5Q92781 318 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 DEFB127Q9H1M4 99 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 OR51I2Q9H344 312 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 TRGV5A0A0B4J1U4 118 aa17.11■□□□□ 0.33
CSPG5-203ENST00000456150 IGSF23A1L1A6 192 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms