RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 FOXB2Q5VYV0 432 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 RPL22L1Q6P5R6 122 aaKnown RBP16.74■□□□□ 0.27
VSX1-206ENST00000444511 ZNF555Q8NEP9 628 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 Q8NFD4 153 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 OR56B4Q8NH76 319 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 RFESDQ8TAC1 157 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 PLPPR1Q8TBJ4 325 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 TMEM106AQ96A25 262 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 LINC00574Q9H8X3 128 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 FGF20Q9NP95 211 aaPredicted RBP16.74■□□□□ 0.27
VSX1-206ENST00000444511 PSG11Q9UQ72 335 aa16.74■□□□□ 0.27
VSX1-206ENST00000444511 CDRT1O95170 752 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 GNG10P50151 68 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 PPP3R1P63098 170 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 PAX5Q02548 391 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 HES1Q14469 280 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 SMN1Q16637 294 aaKnown RBP16.73■□□□□ 0.27
VSX1-206ENST00000444511 XAF1Q6GPH4 301 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 C10orf99Q6UWK7 81 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 ASCL4Q6XD76 172 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 TMPRSS11AQ6ZMR5 421 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 THNSL2Q86YJ6 484 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 DPCDQ9BVM2 203 aaPredicted RBP16.73■□□□□ 0.27
VSX1-206ENST00000444511 ING4Q9UNL4 249 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 ST3GAL6Q9Y274 331 aa16.73■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A18PA6NE21 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A16PA6NEW6 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A20PA6NIJ5 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A9PA6NNJ1 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A12PA8MX19 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A5PA8MXJ8 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 NPIPB11E5RHQ5 1161 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 CLIC3O95833 236 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 CSTBP04080 98 aaKnown RBP16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A15PP0C7V4 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A13PP0C7W8 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A14PP0C7W9 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 FAM90A24PP0C7X0 464 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 DCKP27707 260 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 SSTR5P35346 364 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 ETV1P50549 477 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 RAB7AP51149 207 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 SLC35A2P78381 396 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 DDI2Q5TDH0 399 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 OSR2Q8N2R0 312 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 DRAM1Q8N682 238 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 SUMF2Q8NBJ7 301 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 OR10A7Q8NGE5 316 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 OR10X1Q8NGY0 326 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 S100A13Q99584 98 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 METTL9Q9H1A3 318 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 TMEM138Q9NPI0 162 aa16.72■□□□□ 0.27
VSX1-206ENST00000444511 TRAV39A0A0B4J263 110 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 A0A1W2PPI3 338 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 PSMB11A5LHX3 300 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 WBP4O75554 376 aaKnown RBP16.71■□□□□ 0.27
VSX1-206ENST00000444511 OR7C1O76099 320 aaPredicted RBP16.71■□□□□ 0.27
VSX1-206ENST00000444511 TMEM11P17152 192 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 ZNF93P35789 620 aaPredicted RBP16.71■□□□□ 0.27
VSX1-206ENST00000444511 OR2G6Q5TZ20 316 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 SLC16A12Q6ZSM3 486 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 OR8H3Q8N146 312 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 SMPD3Q9NY59 655 aaPredicted RBP16.71■□□□□ 0.27
VSX1-206ENST00000444511 IL36GQ9NZH8 169 aa16.71■□□□□ 0.27
VSX1-206ENST00000444511 BAG2O95816 211 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 BDKRB2P30411 391 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 RBM11P57052 281 aaKnown RBP16.7■□□□□ 0.26
VSX1-206ENST00000444511 DIAPH2-AS1Q14236 149 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 OR52N1Q8NH53 320 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 RCC1LQ96I51 464 aaKnown RBP16.7■□□□□ 0.26
VSX1-206ENST00000444511 RDH12Q96NR8 316 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 IFT22Q9H7X7 185 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 PAK1IP1Q9NWT1 392 aaPredicted RBP16.7■□□□□ 0.26
VSX1-206ENST00000444511 ZNF581Q9P0T4 197 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 ZNF281Q9Y2X9 895 aa16.7■□□□□ 0.26
VSX1-206ENST00000444511 TMEM30CPA0ZSE6 113 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 IRGMA1A4Y4 181 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 MYL12AP19105 171 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 GZMHP20718 246 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 SERPINA2P20848 420 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 HNF4GQ14541 408 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 SMIM19Q96E16 107 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 BABAM2Q9NXR7 383 aa16.69■□□□□ 0.26
VSX1-206ENST00000444511 A0A1W2PPE3 182 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 GEMIN2O14893 280 aaKnown RBP16.68■□□□□ 0.26
VSX1-206ENST00000444511 MPIG6BO95866 241 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 IGKV1D-33P01593 117 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 IGKV1-33P01594 117 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 RIPK1Q13546 671 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 ATAD3CQ5T2N8 411 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 LINC00596Q86U02 117 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 ZNF329Q86UD4 541 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 C5orf56Q8N8D9 126 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 NEK7Q8TDX7 302 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 ORAI1Q96D31 301 aa16.68■□□□□ 0.26
VSX1-206ENST00000444511 EXOSC1Q9Y3B2 195 aaKnown RBP16.68■□□□□ 0.26
VSX1-206ENST00000444511 SIRT4Q9Y6E7 314 aaPredicted RBP16.68■□□□□ 0.26
VSX1-206ENST00000444511 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
VSX1-206ENST00000444511 HSD17B6O14756 317 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms