RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR10AC1Q8NH08 325 aa14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 EAF1Q96JC9 268 aaPredicted RBP14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 BARHL1Q9BZE3 327 aa14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 LINC00574Q9H8X3 128 aa14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 LIN7CQ9NUP9 197 aaKnown RBP14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 MYRFQ9Y2G1 1151 aa14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 SIRT4Q9Y6E7 314 aaPredicted RBP14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 SACSQ9NZJ4 4579 aa14.34□□□□□ -0.11
UPK3BP1-201ENST00000428678 EPPK1P58107 5090 aaKnown RBP14.33□□□□□ -0.11
UPK3BP1-201ENST00000428678 IGHV1-3A0A0C4DH29 117 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 RRP9O43818 475 aaKnown RBP14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 GAPDHP04406 335 aaKnown RBP14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 ISG15P05161 165 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 ELANEP08246 267 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 HCKP08631 526 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 SSTR5P35346 364 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 NANOS3P60323 173 aaKnown RBP14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 EBI3Q14213 229 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 RCHY1Q96PM5 261 aa14.33□□□□□ -0.12
UPK3BP1-201ENST00000428678 TRAV39A0A0B4J263 110 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 TRAV24A0A0B4J272 114 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 NPIPB11E5RHQ5 1161 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 G3V2T6 193 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 MPZL2O60487 215 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 HTR1AP08908 422 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 DBTP11182 482 aaKnown RBP14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 MTNR1BP49286 362 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZNF816Q0VGE8 651 aaPredicted RBP14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 KDM4DQ6B0I6 523 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 SLC16A12Q6ZSM3 486 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 IZUMO1Q8IYV9 350 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 RNF152Q8N8N0 203 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 Q8N9W7 124 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR2T10Q8NGZ9 312 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 CNIH3Q8TBE1 160 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 C4orf3Q8WVX3 66 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 RFKQ969G6 155 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 NCOR1P1Q9H4R4 102 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZCCHC4Q9H5U6 513 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 GAR1Q9NY12 217 aaKnown RBP14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 ENOPH1Q9UHY7 261 aa14.32□□□□□ -0.12
UPK3BP1-201ENST00000428678 ATP8B1O43520 1251 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 LYL1P12980 280 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZP1P60852 638 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 TMED1Q13445 227 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 KISS1Q15726 138 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 RSBN1Q5VWQ0 802 aaPredicted RBP14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 FDX2Q6P4F2 183 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 Q8N6K4 173 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 CCDC197Q8NCU1 140 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR10A7Q8NGE5 316 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 PLPPR1Q8TBJ4 325 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 EME1Q96AY2 570 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 LYSTQ99698 3801 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 RASL11BQ9BPW5 248 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 PALMDQ9NP74 551 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 POMPQ9Y244 141 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 BIRC6Q9NR09 4857 aa14.31□□□□□ -0.12
UPK3BP1-201ENST00000428678 IGHG4P01861 327 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 VDAC1P21796 283 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 FHL3Q13643 280 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZSCAN26Q16670 478 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 LPCAT4Q643R3 524 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 KCTD20Q7Z5Y7 419 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZDHHC13Q8IUH4 622 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 SBSPONQ8IVN8 264 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR11H1Q8NG94 326 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR8J1Q8NGP2 316 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 CIB1Q99828 191 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 HSPB9Q9BQS6 159 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 FAM118AQ9NWS6 357 aa14.3□□□□□ -0.12
UPK3BP1-201ENST00000428678 DAPL1A0PJW8 107 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 SLC16A6O15403 523 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 GYG2O15488 501 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 POLR2IP36954 125 aaKnown RBP14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 CCR9P51686 369 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 ATP6AP1Q15904 470 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZNF691Q5VV52 312 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 S1PR3Q99500 378 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 RIBC2Q9H4K1 309 aa14.29□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR4C45A6NMZ5 311 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 J3QLW9 94 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 SULT1B1O43704 296 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 MOSP00540 346 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 ZNF19P17023 458 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 KCNJ3P48549 501 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 INSL3P51460 131 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 CFHR3Q02985 330 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 IL13RA2Q14627 380 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 PIGYQ3MUY2 71 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 DNAL1Q4LDG9 190 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 FAM27D1Q5T7N8 215 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 ELP2Q6IA86 826 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 OVCH2Q7RTZ1 564 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR5D14Q8NGL3 314 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 OR10K1Q8NGX5 313 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 GABARAPL1Q9H0R8 117 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 PLSCR3Q9NRY6 295 aa14.28□□□□□ -0.12
UPK3BP1-201ENST00000428678 LCE6AA0A183 80 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms