RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 GABRPO00591 440 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 ATP5HO75947 161 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 GNG10P50151 68 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 RAB7AP51149 207 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 PAX5Q02548 391 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 ZNF529Q6P280 563 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 C8orf86Q6ZUL3 223 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 Q8NFD4 153 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 OR5AK2Q8NH90 309 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 HAVCR2Q8TDQ0 301 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 PYDC1Q8WXC3 89 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 MRPL48Q96GC5 212 aaKnown RBP11.7□□□□□ -0.54
RPS28-201ENST00000417088 PDCD1LG2Q9BQ51 273 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 ZFP57Q9NU63 452 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 DHDHQ9UQ10 334 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 ORC6Q9Y5N6 252 aa11.7□□□□□ -0.54
RPS28-201ENST00000417088 TRAV39A0A0B4J263 110 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 IGKV1D-33P01593 117 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 IGKV1-33P01594 117 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 IGHG2P01859 326 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 RPSAP08865 295 aaKnown RBP11.69□□□□□ -0.54
RPS28-201ENST00000417088 CCDC159P0C7I6 412 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 GABRB1P18505 474 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 RAB3AP20336 220 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 SSTR5P35346 364 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 MYCNOSP40205 109 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 CD69Q07108 199 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 PIGYQ3MUY2 71 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 ASCL4Q6XD76 172 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 SLC16A12Q6ZSM3 486 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 OR10A7Q8NGE5 316 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 OR51A2Q8NGJ7 313 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 OR10K1Q8NGX5 313 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 TNFAIP8L1Q8WVP5 186 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 TSEN15Q8WW01 171 aaKnown RBP11.69□□□□□ -0.54
RPS28-201ENST00000417088 MYCBPQ99417 103 aaPredicted RBP11.69□□□□□ -0.54
RPS28-201ENST00000417088 P2RX4Q99571 388 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 B9D2Q9BPU9 175 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 MCRIP2Q9BUT9 160 aaKnown RBP11.69□□□□□ -0.54
RPS28-201ENST00000417088 ERVK13-1Q9NX77 482 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 ZNF581Q9P0T4 197 aa11.69□□□□□ -0.54
RPS28-201ENST00000417088 A0A1W2PPE3 182 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 NUDT19A8MXV4 375 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 CIB2O75838 187 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 SLC6A1P30531 599 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 KCNJ3P48549 501 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 ALDH3A2P51648 485 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 EBI3Q14213 229 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 SATL1Q86VE3 508 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 STPG2Q8N412 459 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 COMMD1Q8N668 190 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 KLHL30-AS1Q8NEE0 82 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 OR10X1Q8NGY0 326 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 GPER1Q99527 375 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 AMBNQ9NP70 447 aa11.68□□□□□ -0.54
RPS28-201ENST00000417088 H3BNX3 289 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 HSD17B6O14756 317 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 MAGEB3O15480 346 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 HTR3BO95264 441 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 FADS2O95864 444 aaKnown RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 VSIG8P0DPA2 414 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 SOX2P48431 317 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 GTF2A1P52655 376 aaPredicted RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 GBX2P52951 348 aaPredicted RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 SLC35B1P78383 322 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 ZNF816Q0VGE8 651 aaPredicted RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 MRPL28Q13084 256 aaKnown RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 RSU1Q15404 277 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 ZNF695Q8IW36 515 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 FOXRED2Q8IWF2 684 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 RHOXF1Q8NHV9 184 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 RGP1Q92546 391 aaPredicted RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 DUX3Q96PT4 197 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 DPCDQ9BVM2 203 aaPredicted RBP11.67□□□□□ -0.54
RPS28-201ENST00000417088 JAM3Q9BX67 310 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 TAS2R4Q9NYW5 299 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 GMPPBQ9Y5P6 360 aa11.67□□□□□ -0.54
RPS28-201ENST00000417088 IGHV3-72A0A0B4J1Y9 119 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 H0YHG0 523 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 CCRL2O00421 344 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 DYNC1I1O14576 645 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 CDRT1O95170 752 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
RPS28-201ENST00000417088 GZMHP20718 246 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 REG1BP48304 166 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 RAB40BQ12829 278 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 UNQ9370/PRO34162Q6UXP9 181 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 MOB3BQ86TA1 216 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 Q8N6K4 173 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 OR52I1Q8NGK6 324 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 RAX2Q96IS3 184 aa11.66□□□□□ -0.54
RPS28-201ENST00000417088 EAF1Q96JC9 268 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms