RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 C17orf78Q8N4C9 275 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 OR8U1Q8NH10 309 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 RDH5Q92781 318 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 BOD1Q96IK1 185 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 C11orf1Q9H5F2 150 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 ZDHHC11Q9H8X9 412 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 ARHGAP21Q5T5U3 1957 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 SHANK1Q9Y566 2161 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 GPR179Q6PRD1 2367 aa14.36□□□□□ -0.11
NUP50-203ENST00000407019 DANCRP0C864 163 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 UCP1P25874 307 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 CD80P33681 288 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 NPBWR1P48145 328 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
NUP50-203ENST00000407019 DHRS7BQ6IAN0 325 aaPredicted RBP14.35□□□□□ -0.11
NUP50-203ENST00000407019 CMTM1Q8IZ96 169 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 OR2C3Q8N628 320 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 LILRB1Q8NHL6 650 aaPredicted RBP14.35□□□□□ -0.11
NUP50-203ENST00000407019 ABHD14BQ96IU4 210 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 PARP12Q9H0J9 701 aaKnown RBP14.35□□□□□ -0.11
NUP50-203ENST00000407019 DLL3Q9NYJ7 618 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 LUZP4Q9P127 313 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 ZNF407Q9C0G0 2248 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 J3QW42 95 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 ADAM20O43506 726 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 TSPAN15O95858 294 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 HLA-DRB3P79483 266 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 FAM76BQ5HYJ3 339 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 ZNF880Q6PDB4 577 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 C20orf204Q6ZNR8 217 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 P4HA3Q7Z4N8 544 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 CBLN2Q8IUK8 224 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 SUMF1Q8NBK3 374 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 RTL8AQ9BWD3 113 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 IFT22Q9H7X7 185 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 NDRG3Q9UGV2 375 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 MED13Q9UHV7 2174 aa14.35□□□□□ -0.11
NUP50-203ENST00000407019 H0Y980 276 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 RHBDL1O75783 438 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 H2AFB1P0C5Y9 115 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 CAMLGP49069 296 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 POLR2GP62487 172 aaKnown RBP eCLIP14.34□□□□□ -0.11
NUP50-203ENST00000407019 COMMD1Q8N668 190 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 GMPPAQ96IJ6 420 aaPredicted RBP14.34□□□□□ -0.11
NUP50-203ENST00000407019 KIRREL1Q96J84 757 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 GPHA2Q96T91 129 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 CLEC18AA5D8T8 446 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 FAM24AA6NFZ4 105 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 DEGS1O15121 323 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 ZNF44P15621 663 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 S100GP29377 79 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 RAB5CP51148 216 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 ZNF616Q08AN1 781 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 MIDNQ504T8 468 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 NMSQ5H8A3 153 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 TMPRSS7Q7RTY8 843 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 VASH2Q86V25 355 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 CLEC18CQ8NCF0 446 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 OR5D13Q8NGL4 314 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 OR10J5Q8NHC4 309 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 IL22RA2Q969J5 263 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 CABLES2Q9BTV7 478 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 SH3BGRL3Q9H299 93 aa14.34□□□□□ -0.11
NUP50-203ENST00000407019 STRAPQ9Y3F4 350 aaKnown RBP14.34□□□□□ -0.11
NUP50-203ENST00000407019 SSSCA1O60232 199 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 SMPD2O60906 423 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 PGLYRP1O75594 196 aaPredicted RBP14.33□□□□□ -0.12
NUP50-203ENST00000407019 ZNF14P17017 642 aaPredicted RBP14.33□□□□□ -0.12
NUP50-203ENST00000407019 VDAC1P21796 283 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 MRPL49Q13405 166 aaKnown RBP14.33□□□□□ -0.12
NUP50-203ENST00000407019 ZNF324BQ6AW86 544 aaPredicted RBP14.33□□□□□ -0.12
NUP50-203ENST00000407019 HSD17B11Q8NBQ5 300 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 AIFM2Q9BRQ8 373 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 CACFD1Q9UGQ2 172 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 OR2W1Q9Y3N9 320 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 ARID1AO14497 2285 aa14.33□□□□□ -0.12
NUP50-203ENST00000407019 IGSF23A1L1A6 192 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 FAM157AC9JC47 383 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 C9JQL5 133 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 CELA3BP08861 270 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 SNCAP37840 140 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 SOX8P57073 446 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 PPP1CBP62140 327 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 VAMP2P63027 116 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 PMP22Q01453 160 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 TRIP6Q15654 476 aaKnown RBP14.32□□□□□ -0.12
NUP50-203ENST00000407019 Q6P435 159 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 MYPOPQ86VE0 399 aaPredicted RBP14.32□□□□□ -0.12
NUP50-203ENST00000407019 H1FOOQ8IZA3 346 aaPredicted RBP14.32□□□□□ -0.12
NUP50-203ENST00000407019 SLC25A31Q9H0C2 315 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 PLEKHF2Q9H8W4 249 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 C19orf12Q9NSK7 152 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 DNAJC13O75165 2243 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 LRP5LA4QPB2 252 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 C3orf80F5H4A9 247 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 TNFSF12O43508 249 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 PITX3O75364 302 aa14.32□□□□□ -0.12
NUP50-203ENST00000407019 PRH1P02810 166 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms