RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 IL36RNQ9UBH0 155 aa4.41□□□□□ -1.7
HMGB3P7-201ENST00000400214 OPN4Q9UHM6 478 aa4.41□□□□□ -1.7
HMGB3P7-201ENST00000400214 TRAPPC4Q9Y296 219 aa4.41□□□□□ -1.7
HMGB3P7-201ENST00000400214 ZNF443Q9Y2A4 671 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P7-201ENST00000400214 ITPR3Q14573 2671 aa4.41□□□□□ -1.7
HMGB3P7-201ENST00000400214 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
HMGB3P7-201ENST00000400214 MED13LQ71F56 2210 aa4.4□□□□□ -1.7
HMGB3P7-201ENST00000400214 A0A1B0GU03 582 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 PRORSD1PA6NEY8 169 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 CYSRT1A8MQ03 144 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 SEC14L6B5MCN3 397 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 C5orf58C9J3I9 102 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 M0R036 132 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MGST3O14880 152 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 FGF16O43320 207 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MPZL2O60487 215 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 SS18L1O75177 396 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 NPIPB7O75200 414 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 GCM2O75603 506 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 AQP8O94778 261 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 PMS2P2O95744 297 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 TACSTD2P09758 323 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 IGHV4-30-4P0DP06 118 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 COX6B1P14854 86 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 COX5AP20674 150 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 CA6P23280 308 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 SHC1P29353 583 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 POLR2HP52434 150 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR10A3P58181 314 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MTPNP58546 118 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 HILS1P60008 231 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 RPL31P62899 125 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 H3F3AP84243 136 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MLLT11Q13015 90 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 FLOT2Q14254 428 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF239Q16600 458 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 BSXQ3C1V8 233 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 TMEM176BQ3YBM2 270 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 YIF1BQ5BJH7 314 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 FAM120AOSQ5T036 256 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 HBMQ6B0K9 141 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 REP15Q6BDI9 236 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 C8orf82Q6P1X6 216 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 TMPPEQ6ZT21 453 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 Q6ZTK2 550 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF550Q7Z398 422 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR9Q2Q8NGE9 314 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR2AE1Q8NHA4 323 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF502Q8TBZ5 544 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 NEK7Q8TDX7 302 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 DYRK2Q92630 601 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 GTF3AQ92664 365 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 RNASE6Q93091 150 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 S100PBPQ96BU1 408 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 GMPPAQ96IJ6 420 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 WFIKKN1Q96NZ8 548 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 OR5B12Q96R08 314 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 SRXN1Q9BYN0 137 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 BARHL1Q9BZE3 327 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 C12orf10Q9HB07 376 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 ADGRL4Q9HBW9 690 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 KRCC1Q9NPI7 259 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MEPEQ9NQ76 525 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 CTPS2Q9NRF8 586 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 C19orf12Q9NSK7 152 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 FAIMQ9NVQ4 179 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 GID8Q9NWU2 228 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 SDHAF2Q9NX18 166 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 TAS2R16Q9NYV7 291 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 MCTS1Q9ULC4 181 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 HDGFL3Q9Y3E1 203 aa4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 PRRC2AP48634 2157 aaKnown RBP4.4□□□□□ -1.71
HMGB3P7-201ENST00000400214 CHD3Q12873 2000 aaKnown RBP4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 CELSR1Q9NYQ6 3014 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 IGKV3D-15A0A087WSY6 115 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 TMED7-TICAM2A0A0A6YYA0 188 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 hCG_38984A0A1B0GV85 526 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 ANKRD20A5PA0PJZ0 165 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF724A8MTY0 619 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 F5H768 121 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 ACOT8O14734 319 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 MRASO14807 208 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 PRKYO43930 277 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 SOX15O60248 233 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 SERPINB7O75635 380 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 CDK2AP2O75956 126 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 GAGE7O76087 117 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 SERPINA1P01009 418 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 GKN3PP0CG01 181 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 GAGE12FP0CL80 117 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 GAGE12GP0CL81 117 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 GAGE12IP0CL82 117 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 COX4I1P13073 169 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 ZNF35P13682 527 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 HLA-DOBP13765 273 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 CBR1P16152 277 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 CD79BP40259 229 aa4.39□□□□□ -1.71
HMGB3P7-201ENST00000400214 YAP1P46937 504 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms