RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 TRAPPC2LQ9UL33 140 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 NUBP2Q9Y5Y2 271 aa11.44□□□□□ -0.58
VAPB-202ENST00000395802 INMT-MINDY4F8WBC2 141 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 PPIHO43447 177 aaKnown RBP11.43□□□□□ -0.58
VAPB-202ENST00000395802 ZNF205O95201 554 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 FCER2P06734 321 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 CTXN2P0C2S0 81 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 ERP29P30040 261 aaKnown RBP11.43□□□□□ -0.58
VAPB-202ENST00000395802 OR3A1P47881 315 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 CARTPTQ16568 116 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 NLRC3Q7RTR2 1065 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 ZNF554Q86TJ5 538 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 PPP1R14BQ96C90 147 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 PRRT1Q99946 306 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 SHARPINQ9H0F6 387 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 DCAF16Q9NXF7 216 aa11.43□□□□□ -0.58
VAPB-202ENST00000395802 TMEM82A0PJX8 343 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 GPR37O15354 613 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 NDUFB3O43676 98 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 ZNF787Q6DD87 383 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 BTN2A1Q7KYR7 527 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 ARRDC1Q8N5I2 433 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 ZNRF1Q8ND25 227 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 TMEM185AQ8NFB2 350 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 OR4S1Q8NGB4 309 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 MRPL30Q8TCC3 161 aaKnown RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 MARVELD3Q96A59 401 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 GAFA1Q96PS6 74 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 CCL13Q99616 98 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 HDHD3Q9BSH5 251 aaPredicted RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 Q9N2K0 584 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 NECAP2Q9NVZ3 263 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 MIOXQ9UGB7 285 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 ZNF230Q9UIE0 474 aaPredicted RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 MAB21L2Q9Y586 359 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 TRAV6A0A075B6T7 132 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 MEIKINA0A087WXM9 373 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 TRDCB7Z8K6 153 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 ADAM20O43506 726 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 DIRAS3O95661 229 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 IGHV2-70P01814 119 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 PAX1P15863 534 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 GZMHP20718 246 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 HRH1P35367 487 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 GPR6P46095 362 aaPredicted RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 TSPAN5P62079 268 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 HOXA4Q00056 320 aaPredicted RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 AESQ08117 197 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 OR52W1Q6IF63 320 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 ZNF782Q6ZMW2 699 aaPredicted RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 DYRK2Q92630 601 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 SNAPC3Q92966 411 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 TMEM246Q9BRR3 403 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 C20orf85Q9H1P6 137 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 SLC25A10Q9UBX3 287 aaPredicted RBP11.42□□□□□ -0.58
VAPB-202ENST00000395802 LPAR3Q9UBY5 353 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 OPN4Q9UHM6 478 aa11.42□□□□□ -0.58
VAPB-202ENST00000395802 TENM4Q6N022 2769 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 NDUFS8O00217 210 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 PDLIM4P50479 330 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 RAG2P55895 527 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 P2RX3P56373 397 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 RAB25P57735 213 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 CDK10Q15131 360 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 ZNF880Q6PDB4 577 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 OR56B4Q8NH76 319 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
VAPB-202ENST00000395802 METRNQ9UJH8 293 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 PCDHB10Q9UN67 800 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 ALG5Q9Y673 324 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 DCHS2Q6V1P9 2916 aa11.41□□□□□ -0.58
VAPB-202ENST00000395802 LYNX1G3V0Z9 82 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 TNFRSF13BO14836 293 aaPredicted RBP11.4□□□□□ -0.58
VAPB-202ENST00000395802 NDUFB6O95139 128 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 AMY2AP04746 511 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 LYNX1P0DP58 116 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 COL8A1P27658 744 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 NPY4RP50391 375 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 ATP5J2P56134 94 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 EDDM3BP56851 147 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 CD300CQ08708 224 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 EDDM3AQ14507 147 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 OVCH2Q7RTZ1 564 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 OR51S1Q8NGJ8 323 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 OR4A4PQ8NGN8 299 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 PLPPR1Q8TBJ4 325 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 LURAP1Q96LR2 239 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 SLC25A21Q9BQT8 299 aaPredicted RBP11.4□□□□□ -0.58
VAPB-202ENST00000395802 TINAGL1Q9GZM7 467 aaPredicted RBP11.4□□□□□ -0.58
VAPB-202ENST00000395802 ING3Q9NXR8 418 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 SLC2A8Q9NY64 477 aa11.4□□□□□ -0.58
VAPB-202ENST00000395802 ODAMA1E959 279 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 M0QYG6 137 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 FABP7O15540 132 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 PMP2P02689 132 aa11.39□□□□□ -0.59
VAPB-202ENST00000395802 H2AFB2P0C5Z0 115 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms