RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 COL4A4P53420 1690 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-202ENST00000377797 hADV38S2A0JD32 116 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 CYB5BO43169 146 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 CNIH1O95406 144 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 CCL8P80075 99 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 TLE1Q04724 770 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 AESQ08117 197 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 ZIC4Q8N9L1 334 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 SHARPINQ9H0F6 387 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 INTS1Q8N201 2190 aaKnown RBP12.52□□□□□ -0.41
TCOF1-202ENST00000377797 AQP7O14520 342 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 NPBWR2P48146 333 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 UNC119Q13432 240 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 LIAT1Q6ZQX7 453 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 C1orf174Q8IYL3 243 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 OR10S1Q8NGN2 331 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 TMEM68Q96MH6 324 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 Q96M66 194 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 CACNG5Q9UF02 275 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 ASCL1P50553 236 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 LINC00596Q86U02 117 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 MS4A5Q9H3V2 200 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 CACNA1BQ00975 2339 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 hCG_38984A0A1B0GV85 526 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 OOEPA6NGQ2 149 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 OR5H1A6NKK0 313 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 GZMHP20718 246 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
TCOF1-202ENST00000377797 ADGRG7Q96K78 797 aa12.51□□□□□ -0.41
TCOF1-202ENST00000377797 TUBAL3A6NHL2 446 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 TESK1Q15569 626 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 IGFBP7Q16270 282 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 GGNQ86UU5 652 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 TPRX1Q8N7U7 411 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 ADAMTS17Q8TE56 1095 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 MRPL24Q96A35 216 aaKnown RBP12.5□□□□□ -0.41
TCOF1-202ENST00000377797 ZNF319Q9P2F9 582 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 ATP6V1G2-DDX39BF2Z307 99 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 CD80P33681 288 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 FHL1Q13642 323 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 TOR2AQ5JU69 321 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 CENPFP49454 3210 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 IGHV3OR15-7A0A075B7D8 119 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 TXNL1O43396 289 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 PPIHO43447 177 aaKnown RBP12.5□□□□□ -0.41
TCOF1-202ENST00000377797 IGSF11Q5DX21 431 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 C9orf62Q8N4C0 152 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 OR8G5Q8NG78 346 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 ZFP92A6NM28 416 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 GPR37O15354 613 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 OR4A4PQ8NGN8 299 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 RNF122Q9H9V4 155 aa12.5□□□□□ -0.41
TCOF1-202ENST00000377797 NPDC1Q9NQX5 325 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-202ENST00000377797 VDAC1P21796 283 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
TCOF1-202ENST00000377797 PEAR1Q5VY43 1037 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-202ENST00000377797 V9GYS6 101 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 ADAM5Q6NVV9 412 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 LCN15Q6UWW0 184 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 OR2V2Q96R30 315 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 HSF4Q9ULV5 492 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 IGFBP3P17936 291 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-202ENST00000377797 H3F3AP84243 136 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 LGALSLQ3ZCW2 172 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-202ENST00000377797 LYZL2Q7Z4W2 148 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 GPR132Q9UNW8 380 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 CDK2AP1O14519 115 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 DEFA4P12838 97 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 CLLU1Q5K131 121 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 RPUSD3Q6P087 351 aaKnown RBP12.49□□□□□ -0.41
TCOF1-202ENST00000377797 OR2C3Q8N628 320 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 SFXN3Q9BWM7 321 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 PKIBQ9C010 78 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 GAL3ST2Q9H3Q3 398 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 TMEM231Q9H6L2 316 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
TCOF1-202ENST00000377797 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-202ENST00000377797 FAM24AA6NFZ4 105 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 FAM87AP0C7U9 286 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 PRDX2P32119 198 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 RBMXL3Q8N7X1 1067 aaKnown RBP12.48□□□□□ -0.41
TCOF1-202ENST00000377797 LFNGQ8NES3 379 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 BCL2L2Q92843 193 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-202ENST00000377797 TUBG2Q9NRH3 451 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 ZNF355PQ9NSJ1 428 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 CST4P01036 141 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 SCTP09683 121 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 RAB7AP51149 207 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 PXDC1Q5TGL8 231 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 DCAF12L2Q5VW00 463 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 BTNL3Q6UXE8 466 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 TCEAL7Q9BRU2 100 aa12.48□□□□□ -0.41
TCOF1-202ENST00000377797 LRFN3Q9BTN0 628 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms