RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 XIRP2A4UGR9 3374 aa13.96□□□□□ -0.17
CHD1L-203ENST00000369259 DUXBA0A1W2PPF3 345 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 TCF21O43680 179 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 TRA2AQ13595 282 aaKnown RBP eCLIP13.96□□□□□ -0.181e-7■■■□□ 17
CHD1L-203ENST00000369259 KCNMB1Q16558 191 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 CARD17Q5XLA6 110 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 FBXW9Q5XUX1 488 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 SDSLQ96GA7 329 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 GPR35Q9HC97 309 aa13.96□□□□□ -0.18
CHD1L-203ENST00000369259 ADAMTS9Q9P2N4 1935 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 ANKUB1A6NFN9 424 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 H3BML4 177 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 TNFSF12O43508 249 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 SPRY1O43609 319 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-203ENST00000369259 VDAC1P21796 283 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 MDH2P40926 338 aaKnown RBP13.95□□□□□ -0.18
CHD1L-203ENST00000369259 HHEXQ03014 270 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 RPUSD4Q96CM3 377 aaKnown RBP13.95□□□□□ -0.18
CHD1L-203ENST00000369259 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 MEF2BQ02080 365 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-203ENST00000369259 BATFQ16520 125 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 SAPCD1Q5SSQ6 148 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM256Q8N2U0 113 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 POC1BQ8TC44 478 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 PSMG3Q9BT73 122 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-203ENST00000369259 PCED1AQ9H1Q7 454 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 ZFP30Q9Y2G7 519 aa13.95□□□□□ -0.18
CHD1L-203ENST00000369259 LTBP2Q14767 1821 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 SHANK1Q9Y566 2161 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 IGKV3D-11A0A0A0MRZ8 115 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 F5H5K5 113 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 UMODP07911 640 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 CELA2BP08218 269 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-203ENST00000369259 ENDOGQ14249 297 aaKnown RBP13.94□□□□□ -0.18
CHD1L-203ENST00000369259 SPIN3Q5JUX0 258 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 C12orf76Q8N812 135 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-203ENST00000369259 NAT6Q93015 286 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 C10orf35Q96D05 121 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 PLSCR2Q9NRY7 297 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 H3BP45 60 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 LILRA1O75019 489 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 OR2J2O76002 312 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 RANP62826 216 aaKnown RBP13.94□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM267Q0VDI3 215 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-203ENST00000369259 COL5A1-AS1Q5SY13 56 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 KCNIP4Q6PIL6 250 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 TOMM20LQ6UXN7 152 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 PRSS58Q8IYP2 241 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 MRGPRX4Q96LA9 322 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 DNAJC4Q9NNZ3 241 aa13.94□□□□□ -0.18
CHD1L-203ENST00000369259 VSTM2BA6NLU5 285 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM250H0YL14 139 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 YPEL1O60688 119 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TNFP01375 233 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 LCN2P80188 198 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 SERF2P84101 59 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 OR8B8Q15620 311 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM41BQ5BJD5 291 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TEX43Q6ZNM6 134 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 Q6ZSR3 168 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 NUFIP2Q7Z417 695 aaKnown RBP13.93□□□□□ -0.18
CHD1L-203ENST00000369259 WDR5BQ86VZ2 330 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 LRP11Q86VZ4 500 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 YPEL2Q96QA6 119 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 RASL10BQ96S79 203 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TAAR3PQ9P1P4 343 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 MYO7BQ6PIF6 2116 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 ATG2AQ2TAZ0 1938 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 NUPR1O60356 82 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 CST9LP1Q5W188 147 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 IL22RA2Q969J5 263 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 REPIN1Q9BWE0 567 aaKnown RBP13.93□□□□□ -0.18
CHD1L-203ENST00000369259 PARLQ9H300 379 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM106BQ9NUM4 274 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 COPS7AQ9UBW8 275 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 TRAPPC1Q9Y5R8 145 aa13.93□□□□□ -0.18
CHD1L-203ENST00000369259 ACRP10323 421 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 UCP1P25874 307 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 RPL15P61313 204 aaKnown RBP13.92□□□□□ -0.18
CHD1L-203ENST00000369259 PIGYQ3MUY2 71 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 TDRG1Q3Y452 100 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 FAM180AQ6UWF9 173 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 Q6ZPA2 131 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 C11orf42Q8N5U0 333 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 LHX4Q969G2 390 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 SLC7A10Q9NS82 523 aa13.92□□□□□ -0.18
CHD1L-203ENST00000369259 A0A1B0GUS0 222 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 SHISA8B8ZZ34 492 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 TRAF3IP2O43734 574 aaPredicted RBP13.91□□□□□ -0.18
CHD1L-203ENST00000369259 FOSL2P15408 326 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 KIR2DL1P43626 348 aaPredicted RBP13.91□□□□□ -0.18
CHD1L-203ENST00000369259 RAB7AP51149 207 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
CHD1L-203ENST00000369259 MYBPHQ13203 477 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM183BQ1AE95 376 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 TMEM211Q6ICI0 200 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 ZNF295-AS1Q8N0V1 137 aa13.91□□□□□ -0.18
CHD1L-203ENST00000369259 ZNF441Q8N8Z8 693 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms