RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MSI2Q96DH6 328 aaKnown RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 ABHD14BQ96IU4 210 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 ADAT1Q9BUB4 502 aaKnown RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 TMEM100Q9NV29 134 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 ESPL1Q14674 2120 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 NPIPB11E5RHQ5 1161 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 PHF1O43189 567 aaPredicted RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 LYZL6O75951 148 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 RPL12P30050 165 aaKnown RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 KIR2DL2P43627 348 aaPredicted RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 KCNJ3P48549 501 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 ATMQ13315 3056 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 ACSF3Q4G176 576 aaPredicted RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 IGSF11Q5DX21 431 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 Q6ZPA2 131 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 SPERTQ8NA61 448 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 RELL2Q8NC24 303 aaPredicted RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 C17orf50Q8WW18 174 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 KIRREL1Q96J84 757 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 CABLES2Q9BTV7 478 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 BCL2L14Q9BZR8 327 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 OR2J1Q9GZK6 312 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 TMEM222Q9H0R3 208 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 BARX1Q9HBU1 254 aaPredicted RBP11.94□□□□□ -0.5
USF1-202ENST00000368020 CYTL1Q9NRR1 136 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 TAS2R3Q9NYW6 316 aa11.94□□□□□ -0.5
USF1-202ENST00000368020 SHANK1Q9Y566 2161 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 USP24Q9UPU5 2620 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 CRYABP02511 175 aaKnown RBP11.93□□□□□ -0.5
USF1-202ENST00000368020 HKR1P10072 659 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 HLA-DRB3P79483 266 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 OR1J1Q8NGS3 322 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 MRPL30Q8TCC3 161 aaKnown RBP11.93□□□□□ -0.5
USF1-202ENST00000368020 IL22RA2Q969J5 263 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 SAT2Q96F10 170 aaPredicted RBP11.93□□□□□ -0.5
USF1-202ENST00000368020 TMEM56Q96MV1 263 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 TAAR6Q96RI8 345 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 OR51B6Q9H340 312 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 TMEM56-RWDD3S4R434 201 aa11.93□□□□□ -0.5
USF1-202ENST00000368020 SH2D1BO14796 132 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 BET1O15155 118 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 ST8SIA3O43173 380 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 WNT2P09544 360 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 PGA5P0DJD9 388 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 ZNF44P15621 663 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 GNRHRP30968 328 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 ERVK11-1P61568 191 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 OR8G1Q15617 311 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 SPATA46Q5T0L3 261 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 BEND4Q6ZU67 534 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 OR10J5Q8NHC4 309 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 SLC25A40Q8TBP6 338 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 ARL11Q969Q4 196 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 MARC2Q969Z3 335 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 ZNF71Q9NQZ8 489 aaPredicted RBP11.92□□□□□ -0.5
USF1-202ENST00000368020 PROCRQ9UNN8 238 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 UBE2J1Q9Y385 318 aaPredicted RBP11.92□□□□□ -0.5
USF1-202ENST00000368020 ATRXP46100 2492 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 RP1L1Q8IWN7 2480 aaPredicted RBP11.92□□□□□ -0.5
USF1-202ENST00000368020 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 GTF3C1Q12789 2109 aa11.92□□□□□ -0.5
USF1-202ENST00000368020 TRAV24A0A0B4J272 114 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 MBD3L4A6NDZ8 208 aaPredicted RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 MBD3L3A6NE82 208 aaPredicted RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 MSGN1A6NI15 193 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 MBD3L5A6NJ08 208 aaPredicted RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 LILRA1O75019 489 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 P2RY1P47900 373 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 GNMTQ14749 295 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 ZNF146Q15072 292 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 C9orf106Q8NAJ2 232 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 MBD3L2Q8NHZ7 208 aaPredicted RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 SECTM1Q8WVN6 248 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 NRIP2Q9BQI9 281 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 NARFLQ9H6Q4 476 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 TAF9BQ9HBM6 251 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 BORCS7-ASMTA0A0B4J1R7 106 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 H0Y980 276 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 NXPH2O95156 264 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 CELA3BP08861 270 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 SCTP09683 121 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 PVALBP20472 110 aaPredicted RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 TSC22D1Q15714 1073 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 SP6Q3SY56 376 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 Q6P435 159 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 LYZL2Q7Z4W2 148 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 TBC1D26Q86UD7 250 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 ZNF695Q8IW36 515 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 BATF2Q8N1L9 274 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 OR8G5Q8NG78 346 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 KLF14Q8TD94 323 aaPredicted RBP11.91□□□□□ -0.5
USF1-202ENST00000368020 LINC00052Q96N35 136 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 IL36RNQ9UBH0 155 aa11.91□□□□□ -0.5
USF1-202ENST00000368020 OR2W1Q9Y3N9 320 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms