RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CLDND2Q8NHS1 167 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 PPCDCQ96CD2 204 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 PHYHIPLQ96FC7 376 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM101Q96IK0 257 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR7D2Q96RA2 312 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 NOX3Q9HBY0 568 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 C1orf109Q9NX04 203 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 UTP11Q9Y3A2 253 aaKnown RBP3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 CSDC2Q9Y534 153 aaKnown RBP3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 N6AMT1Q9Y5N5 214 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 DNAJC15Q9Y5T4 150 aa3.88□□□□□ -1.79
RNU4-39P-201ENST00000362455 IGHV2OR16-5A0A0B4J2B6 119 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 A0A0G2JLM5 398 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 KIR2DL5BA0A0G2JN68 375 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 KIR2DL5BA0A0G2JPC4 375 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM72A0PK05 275 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 B4DSR2 109 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 hCG_2039718K7EN88 272 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 SCAMP2O15127 329 aaKnown RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 SCN2BO60939 215 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 RP2O75695 350 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 CSTAP01040 98 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 CRYGBP07316 175 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 ADRA2AP08913 450 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 LINC00032P0C843 101 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 UBTFL6P0CB48 400 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 TCN1P20061 433 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 TAC1P20366 129 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 FUT3P21217 361 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 CD1BP29016 333 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 YAP1P46937 504 aaKnown RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR2B6P58173 313 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 PRPS1P60891 318 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 LYZP61626 148 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 SNRPD2P62316 118 aaKnown RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 RPL38P63173 70 aaKnown RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 HBA1P69905 142 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 IMPG1Q17R60 797 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 CASC10Q5T4H9 136 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 GPR157Q5UAW9 335 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 OTPQ5XKR4 325 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 CASP12Q6UXS9 341 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF620Q6ZNG0 422 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 LRP11Q86VZ4 500 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 C11orf53Q8IXP5 236 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 KIR2DL5AQ8N109 375 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 PNKDQ8N490 385 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR5AK3PQ8NH89 298 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 KIR2DL5BQ8NHK3 375 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 FANK1Q8TC84 345 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR5P2Q8WZ92 322 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 ARPC1AQ92747 370 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 RAB8BQ92930 207 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 YIPF5Q969M3 257 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 AURKBQ96GD4 344 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 MBOAT4Q96T53 435 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 RSPO3Q9BXY4 272 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 TPK1Q9H3S4 243 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 MYOZ1Q9NP98 299 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 RRAGDQ9NQL2 400 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 EMC3Q9P0I2 261 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 PSMC3IPQ9P2W1 217 aaPredicted RBP3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 OPN4Q9UHM6 478 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 TRAPPC4Q9Y296 219 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 HDGFL3Q9Y3E1 203 aa3.87□□□□□ -1.79
RNU4-39P-201ENST00000362455 YLPM1P49750 1951 aaKnown RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMED7-TICAM2A0A0A6YYA0 188 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ARPC4-TTLL3A0A0A6YYG9 625 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 H3BNH8 94 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 GPR171O14626 319 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 PLIN3O60664 434 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR12D1P0DN82 309 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 FMO3P31513 532 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 PHBP35232 272 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 IDH2P48735 452 aaKnown RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 DNAJB13P59910 316 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 GNB2P62879 340 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ACTG1P63261 375 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ARHGAP11BQ3KRB8 267 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 PAGE3Q5JUK9 113 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 RNF165Q6ZSG1 346 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 SLC25A48Q6ZT89 311 aaKnown RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 EIF3MQ7L2H7 374 aaKnown RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 GRINAQ7Z429 371 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 C6orf120Q7Z4R8 191 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 CLECL1Q8IZS7 167 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 C20orf203Q8NBC4 194 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 PIGXQ8TBF5 258 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ACOT11Q8WXI4 607 aaPredicted RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 C22orf15Q8WYQ4 148 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 LRRC58Q96CX6 371 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZMYND19Q96E35 227 aaPredicted RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 CHMP6Q96FZ7 201 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF75AQ96N20 296 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 OR8B4Q96RC9 309 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 TMEM246Q9BRR3 403 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 MRPL37Q9BZE1 423 aaKnown RBP3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 MFFQ9GZY8 342 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 RAB1BQ9H0U4 201 aa3.86□□□□□ -1.79
RNU4-39P-201ENST00000362455 ZNF442Q9H7R0 627 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 381.7 ms