RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CXXC4Q9H2H0 198 aa14.18□□□□□ -0.14
SAMM50-201ENST00000350028 CYTL1Q9NRR1 136 aa14.18□□□□□ -0.14
SAMM50-201ENST00000350028 IGKV1-6A0A0C4DH72 117 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 MSGN1A6NI15 193 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 CDIPTO14735 213 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 SH2D1BO14796 132 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 TAAR5O14804 337 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 DEDDO75618 318 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 NXPH2O95156 264 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 ZNF146Q15072 292 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 SPIN3Q5JUX0 258 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 C1orf185Q5T7R7 199 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 FIP1L1Q6UN15 594 aaKnown RBP14.17□□□□□ -0.14
SAMM50-201ENST00000350028 LYZL2Q7Z4W2 148 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 BAP18Q8IXM2 172 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 EIF4E3Q8N5X7 224 aaKnown RBP14.17□□□□□ -0.14
SAMM50-201ENST00000350028 SPERTQ8NA61 448 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 SECTM1Q8WVN6 248 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 TMED3Q9Y3Q3 217 aa14.17□□□□□ -0.14
SAMM50-201ENST00000350028 H0YL77 283 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 OR2H2O95918 312 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 GRPP07492 148 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 ZNF250P15622 560 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 EIF5AP63241 154 aaKnown RBP14.16□□□□□ -0.14
SAMM50-201ENST00000350028 PCSK4Q6UW60 755 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 C20orf204Q6ZNR8 217 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 C5orf24Q7Z6I8 188 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 CABLES2Q9BTV7 478 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 SCNM1Q9BWG6 230 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 DNTTIP1Q9H147 329 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 SLC25A15Q9Y619 301 aa14.16□□□□□ -0.14
SAMM50-201ENST00000350028 IGHV2OR16-5A0A0B4J2B6 119 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 IGHV1-18A0A0C4DH31 117 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 SLC33A1O00400 549 aaPredicted RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 HKR1P10072 659 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 GCH1P30793 250 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 KRTCAP3Q53RY4 240 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 FAM74A1Q5RGS3 127 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TBC1D26Q86UD7 250 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 FOXRED2Q8IWF2 684 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TP53RKQ96S44 253 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TMEM222Q9H0R3 208 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 PLEKHA2Q9HB19 425 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TINAGQ9UJW2 476 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 UBE2J1Q9Y385 318 aaPredicted RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 CACNA1GO43497 2377 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 MKRN2OSH3BPM6 223 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 SIRPB1O00241 398 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 MLNRO43193 412 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TIMM8AO60220 97 aaPredicted RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 FGF2P09038 288 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TIMP3P35625 211 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 MBNL2Q5VZF2 373 aaKnown RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 ZNF324BQ6AW86 544 aaPredicted RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 ZNF497Q6ZNH5 498 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 H1FOOQ8IZA3 346 aaPredicted RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 GAPTQ8N292 157 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 OR10J5Q8NHC4 309 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 KIRREL1Q96J84 757 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TMEM56Q96MV1 263 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 HES4Q9HCC6 221 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 ZC4H2Q9NQZ6 224 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 GLS2Q9UI32 602 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 LSM5Q9Y4Y9 91 aaKnown RBP14.15□□□□□ -0.14
SAMM50-201ENST00000350028 FAM215AQ9Y5M1 114 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 TMEM56-RWDD3S4R434 201 aa14.15□□□□□ -0.14
SAMM50-201ENST00000350028 SHANK1Q9Y566 2161 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 IGKV1D-13A0A0B4J2D9 117 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 A8MXK9 166 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 E5RGE8 158 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 NPIPB11E5RHQ5 1161 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 C3orf80F5H4A9 247 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 K7EPK0 472 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 HOXD4P09016 255 aaPredicted RBP14.14□□□□□ -0.15
SAMM50-201ENST00000350028 IGKV1-13P0DP09 117 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 RCC1P18754 421 aaPredicted RBP14.14□□□□□ -0.15
SAMM50-201ENST00000350028 S100GP29377 79 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 RPL12P30050 165 aaKnown RBP14.14□□□□□ -0.15
SAMM50-201ENST00000350028 PLA2G5P39877 138 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 ZNF818PQ6ZRF7 136 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 CMTM1Q8IZ96 169 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 FAM71E2Q8N5Q1 922 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 LHFPL5Q8TAF8 219 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 CCL28Q9NRJ3 127 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 NSG2Q9Y328 171 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 OR2W1Q9Y3N9 320 aa14.14□□□□□ -0.15
SAMM50-201ENST00000350028 CACNA1AO00555 2505 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 GTF3C1Q12789 2109 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 DUXBA0A1W2PPF3 345 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 K7EM74 188 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 FGF16O43320 207 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 SCGB1D2O95969 90 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 MBPP02686 304 aaPredicted RBP14.13□□□□□ -0.15
SAMM50-201ENST00000350028 GLI4P10075 376 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 ZP3P21754 424 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 MZT1Q08AG7 82 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 TIMM23BQ5SRD1 257 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 TMEM268Q5VZI3 342 aa14.13□□□□□ -0.15
SAMM50-201ENST00000350028 MEX3BQ6ZN04 569 aaKnown RBP14.13□□□□□ -0.15
SAMM50-201ENST00000350028 C11orf53Q8IXP5 236 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms