RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ACTG1P63261 375 aa22.45■■□□□ 1.18
SSBP4-202ENST00000348495 EDDM3AQ14507 147 aa22.45■■□□□ 1.18
SSBP4-202ENST00000348495 NLRC3Q7RTR2 1065 aa22.45■■□□□ 1.18
SSBP4-202ENST00000348495 NARFLQ9H6Q4 476 aa22.45■■□□□ 1.18
SSBP4-202ENST00000348495 CHMP1AQ9HD42 196 aaPredicted RBP22.45■■□□□ 1.18
SSBP4-202ENST00000348495 SRSF7Q16629 238 aaKnown RBP eCLIP22.44■■□□□ 1.18
SSBP4-202ENST00000348495 Q6ZS49 121 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 TPRX1Q8N7U7 411 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 OR8B3Q8NGG8 313 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 OR4K15Q8NH41 348 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 OR8B2Q96RD0 313 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 Q9N2K0 584 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 ABCB10Q9NRK6 738 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 MBNL3Q9NUK0 354 aaKnown RBP22.44■■□□□ 1.18
SSBP4-202ENST00000348495 PCDHB10Q9UN67 800 aa22.44■■□□□ 1.18
SSBP4-202ENST00000348495 A0A1W2PQ09 198 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 RCVRNP35243 200 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 CLEC12BQ2HXU8 276 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 TRIQKQ629K1 86 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 SNAPC3Q92966 411 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 ST6GALNAC5Q9BVH7 336 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 IFT46Q9NQC8 304 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 ZNF107Q9UII5 783 aaPredicted RBP22.43■■□□□ 1.18
SSBP4-202ENST00000348495 PDZD2O15018 2839 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 ODAMA1E959 279 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 NDUFB7P17568 137 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 LYSMD2Q8IV50 215 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 MAFIPQ8WZ33 124 aa22.43■■□□□ 1.18
SSBP4-202ENST00000348495 IGKV1D-8A0A087WSZ0 117 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 MEIKINA0A087WXM9 373 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 IGHV2-5P01817 119 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 FCER2P06734 321 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 RCC1P18754 421 aaPredicted RBP22.42■■□□□ 1.18
SSBP4-202ENST00000348495 EDDM3BP56851 147 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 SEC61A1P61619 476 aaKnown RBP22.42■■□□□ 1.18
SSBP4-202ENST00000348495 STEAP3Q658P3 488 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 CLDND2Q8NHS1 167 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 CCDC107Q8WV48 283 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 PALMDQ9NP74 551 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 TAS2R8Q9NYW2 309 aa22.42■■□□□ 1.18
SSBP4-202ENST00000348495 ANKRD20A5PA0PJZ0 165 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 FUOMA2VDF0 154 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 GPR37O15354 613 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 LMO4P61968 165 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 KLF9Q13886 244 aaPredicted RBP22.41■■□□□ 1.18
SSBP4-202ENST00000348495 WDR25Q64LD2 544 aaPredicted RBP22.41■■□□□ 1.18
SSBP4-202ENST00000348495 OR52W1Q6IF63 320 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 MOB1BQ7L9L4 216 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 KRTAP1-3Q8IUG1 177 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 BEST4Q8NFU0 473 aa22.41■■□□□ 1.18
SSBP4-202ENST00000348495 DSCAML1Q8TD84 2053 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 TRAV39A0A0B4J263 110 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 NPY4RP50391 375 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 DCTN2Q13561 401 aaKnown RBP22.4■■□□□ 1.18
SSBP4-202ENST00000348495 CR1LQ2VPA4 569 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 PRSS57Q6UWY2 283 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 DCTN5Q9BTE1 182 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 CLN8Q9UBY8 286 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 TRAPPC2LQ9UL33 140 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 IGHV4-61A0A0C4DH41 118 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 CSF1P09603 554 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 C16orf87Q6PH81 154 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 TCF23Q7RTU1 214 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 TMEM229BQ8NBD8 167 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 OR13A1Q8NGR1 328 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 SETD6Q8TBK2 473 aa22.4■■□□□ 1.18
SSBP4-202ENST00000348495 MALRD1Q5VYJ5 2156 aa22.39■■□□□ 1.18
SSBP4-202ENST00000348495 GSTT2BP0CG30 244 aa22.39■■□□□ 1.17
SSBP4-202ENST00000348495 SLC25A16P16260 332 aa22.39■■□□□ 1.17
SSBP4-202ENST00000348495 MEF2CQ06413 473 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-202ENST00000348495 TOMM5Q8N4H5 51 aa22.39■■□□□ 1.17
SSBP4-202ENST00000348495 C19orf12Q9NSK7 152 aa22.39■■□□□ 1.17
SSBP4-202ENST00000348495 ANXA10Q9UJ72 324 aa22.39■■□□□ 1.17
SSBP4-202ENST00000348495 MGAT4AQ9UM21 535 aa22.39■■□□□ 1.17
SSBP4-202ENST00000348495 ECDO95905 644 aaPredicted RBP22.38■■□□□ 1.17
SSBP4-202ENST00000348495 Q5PR19 223 aa22.38■■□□□ 1.17
SSBP4-202ENST00000348495 ZNF286AQ9HBT8 521 aa22.38■■□□□ 1.17
SSBP4-202ENST00000348495 OR6C3Q9NZP0 311 aa22.38■■□□□ 1.17
SSBP4-202ENST00000348495 TRDCB7Z8K6 153 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 CD74P04233 296 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 CGB3P0DN86 165 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 CGB7P0DN87 165 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 HLA-DMAP28067 261 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 TAS2R19P59542 299 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 RPL31P62899 125 aaKnown RBP22.37■■□□□ 1.17
SSBP4-202ENST00000348495 HMGN3Q15651 99 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 ZNF554Q86TJ5 538 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 MRGPRDQ8TDS7 321 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 CORO2AQ92828 525 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 TRBV23-1A0A0A0MS06 115 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 KIR2DS1A0A191URI9 304 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 ZNF736B4DX44 427 aaPredicted RBP22.37■■□□□ 1.17
SSBP4-202ENST00000348495 PLA2G10O15496 165 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 CD3DP04234 171 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 KIR2DS4P43632 304 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 AP3S2P59780 193 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 KIR2DS1Q14954 304 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 ZNF57Q68EA5 555 aaPredicted RBP22.37■■□□□ 1.17
SSBP4-202ENST00000348495 C5orf24Q7Z6I8 188 aa22.37■■□□□ 1.17
SSBP4-202ENST00000348495 ZFAND2BQ8WV99 257 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms