RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 PCDHB10Q9UN67 800 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 LRP5LA4QPB2 252 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 CYB5AP00167 134 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 TMEM50BP56557 158 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 UBE2MP61081 183 aaKnown RBP12.43□□□□□ -0.42
CXCL12-201ENST00000343575 NKAPLQ5M9Q1 402 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 TMEM200AQ86VY9 491 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 SAXO1Q8IYX7 474 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 PUSL1Q8N0Z8 303 aaKnown RBP12.43□□□□□ -0.42
CXCL12-201ENST00000343575 ZDHHC22Q8N966 263 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 DMBX1Q8NFW5 382 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 SLAMF9Q96A28 289 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 SEC11CQ9BY50 192 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 ELL3Q9HB65 397 aaPredicted RBP12.43□□□□□ -0.42
CXCL12-201ENST00000343575 ZFP57Q9NU63 452 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 RNF115Q9Y4L5 304 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 COL12A1Q99715 3063 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 CACNA1DQ01668 2161 aa12.43□□□□□ -0.42
CXCL12-201ENST00000343575 OR2AT4A6NND4 320 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 F5H0A9 414 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 SOCS1O15524 211 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 HTR3BO95264 441 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PTBP3O95758 552 aaKnown RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 BCL3P20749 454 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 HOXA4Q00056 320 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 IL24Q13007 206 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 DHRS2Q13268 280 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 RSU1Q15404 277 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 MST1LQ2TV78 715 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 AVPI1Q5T686 147 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ATPAF1Q5TC12 328 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 LDLRAD3Q86YD5 345 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 OR2Z1Q8NG97 314 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 RNF141Q8WVD5 230 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 SEH1LQ96EE3 360 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PIK3IP1Q96FE7 263 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 Q96M66 194 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF488Q96MN9 340 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 TM2D1Q9BX74 207 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PKIBQ9C010 78 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 CHST6Q9GZX3 395 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 CST11Q9H112 138 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 TLNRD1Q9H1K6 362 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 CXXC4Q9H2H0 198 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 NOP16Q9Y3C1 178 aaKnown RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ARFGEF3Q5TH69 2177 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 A0A1W2PPR1 153 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 J3QT63 122 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 CDIPTO14735 213 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PAX6P26367 422 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ERVK11-1P61568 191 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 CYCSP99999 105 aaKnown RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 GUCA2BQ16661 112 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PLAC9Q5JTB6 97 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 FAM74A1Q5RGS3 127 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PRAMEF6Q5VXH4 476 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF826PQ6ZT77 177 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 LYG2Q86SG7 212 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 S100A13Q99584 98 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PHB2Q99623 299 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 SELENOIQ9C0D9 397 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 PLK3Q9H4B4 646 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 ZMAT3Q9HA38 289 aaKnown RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 IL36RNQ9UBH0 155 aa12.42□□□□□ -0.42
CXCL12-201ENST00000343575 UBR5O95071 2799 aaPredicted RBP12.42□□□□□ -0.42
CXCL12-201ENST00000343575 TMEM210A6NLX4 147 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 AMY2AP04746 511 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 S100A8P05109 93 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 GRPP07492 148 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 FOLR2P14207 255 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 SERPINF1P36955 418 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 CD200P41217 278 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 OR1S2Q8NGQ3 325 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 MMP26Q9NRE1 261 aa12.41□□□□□ -0.42
CXCL12-201ENST00000343575 HRNRQ86YZ3 2850 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 METTL21EPA6NDL7 271 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 GPR31O00270 319 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 SPRY3O43610 288 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 IGHV1-46P01743 117 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF260Q3ZCT1 412 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF672Q499Z4 452 aaPredicted RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 TMED4Q7Z7H5 227 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 FBXL14Q8N1E6 418 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 ZCCHC24Q8N2G6 241 aaKnown RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 OR10R2Q8NGX6 335 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 MITD1Q8WV92 249 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 PPP1R1CQ8WVI7 109 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 WDR13Q9H1Z4 485 aa12.4□□□□□ -0.42
CXCL12-201ENST00000343575 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
CXCL12-201ENST00000343575 TRBV6-7A0A0A0MS04 114 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms