RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CALYQ9NYX4 217 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 DAPK2Q9UIK4 370 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 SESN1Q9Y6P5 492 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 TEP1Q99973 2627 aaKnown RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 FN1P02751 2386 aaKnown RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 ZNF469Q96JG9 3925 aaPredicted RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 IGHV2-26A0A0B4J1V2 119 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 A0A0B4J203 849 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 SHISA3A0PJX4 238 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A10PA6NDY2 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A18PA6NE21 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A16PA6NEW6 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A20PA6NIJ5 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A8PA6NJQ4 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A7PA6NKC0 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 IFITM5A6NNB3 132 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A22PA8MWA6 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A12PA8MX19 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A5PA8MXJ8 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A23PA8MXZ1 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 SDCBPO00560 298 aaPredicted RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 AIREO43918 545 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 IGHV3-7P01780 117 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 IGHV4-59P01825 116 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 RBP4P02753 201 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 CRYBA1P05813 215 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 MELTFP08582 738 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A15PP0C7V4 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A13PP0C7W8 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A14PP0C7W9 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM90A24PP0C7X0 464 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 SLC2A2P11168 524 aaPredicted RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 FUT3P21217 361 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 PAX6P26367 422 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 SSTR5P35346 364 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 VEGFCP49767 419 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 DLX6P56179 175 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 MRPS15P82914 257 aaKnown RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 UNC119Q13432 240 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 FAM189A2Q15884 450 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 C2orf76Q3KRA6 126 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 MIDNQ504T8 468 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 C6orf183Q5T699 404 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 IDNKQ5T6J7 187 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 SLC35E4Q6ICL7 350 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 BAIAP2L2Q6UXY1 529 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 OR2W3Q7Z3T1 314 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 C6orf201Q7Z4U5 140 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 LYPD6Q86Y78 171 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 ABHD12Q8N2K0 398 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 ZDHHC22Q8N966 263 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 Q8NFD4 153 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 RFESDQ8TAC1 157 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 SSMEM1Q8WWF3 244 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 GCDHQ92947 438 aaPredicted RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 TNFRSF14Q92956 283 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 LEAP2Q969E1 77 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 CENPOQ9BU64 300 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 ATG5Q9H1Y0 275 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 DPAGT1Q9H3H5 408 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 RNF167Q9H6Y7 350 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 IFT22Q9H7X7 185 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 UNKLQ9H9P5 680 aaKnown RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 ESM1Q9NQ30 184 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 ABCB10Q9NRK6 738 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 PLEKHJ1Q9NW61 149 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 TAS2R3Q9NYW6 316 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 IDI2-AS1Q9NZ38 188 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 KCNIP1Q9NZI2 227 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 HILPDAQ9Y5L2 63 aa5.33□□□□□ -1.56
CD44-204ENST00000279452 YLPM1P49750 1951 aaKnown RBP5.33□□□□□ -1.56
CD44-204ENST00000279452 ABCA1O95477 2261 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 IGHV3-43A0A0B4J1X8 118 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 TMEM272A0A1B0GTI8 110 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 KBTBD11-OT1A0A1B0GTJ5 212 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 NOTOA8MTQ0 251 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 TMEM14DPA8MWL7 114 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 SOCS1O15524 211 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 SPINT2O43291 252 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 MMP23AO75900 390 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 IL1AP01583 271 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 CLEC2LP0C7M8 214 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 IGHV3-43DP0DP04 118 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 CHATP28329 748 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 FGF9P31371 208 aaPredicted RBP5.32□□□□□ -1.56
CD44-204ENST00000279452 SDC2P34741 201 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 GDNFP39905 211 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 SLC9A3R2Q15599 337 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 SSX2Q16385 188 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 LY6EQ16553 131 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 C17orf58Q2M2W7 97 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 LRRC75BQ2VPJ9 315 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 KRTAP21-3Q3LHN1 58 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 HCP5Q6MZN7 132 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 SFXN4Q6P4A7 337 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 HEPN1Q6WQI6 88 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 Q6YL49 198 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 ZNF497Q6ZNH5 498 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 LHFPL4Q7Z7J7 247 aa5.32□□□□□ -1.56
CD44-204ENST00000279452 TPRA1Q86W33 373 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms