RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TBC1D26Q86UD7 250 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 LDLRAD3Q86YD5 345 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 C1orf174Q8IYL3 243 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 FAM71E2Q8N5Q1 922 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 TP53RKQ96S44 253 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 AMDHD2Q9Y303 409 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 TMED3Q9Y3Q3 217 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 IGKV1-6A0A0C4DH72 117 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 H0YL77 283 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 SIRPB1O00241 398 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 SLC33A1O00400 549 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 TIMM8AO60220 97 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 OR2H2O95918 312 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 IGLV1-44P01699 117 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 FGF2P09038 288 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 ACAA1P09110 424 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 HKR1P10072 659 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 ZP3P21754 424 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 RPL12P30050 165 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 EIF5AP63241 154 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 MEX3BQ6ZN04 569 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF818PQ6ZRF7 136 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 SEM1Q6ZVN7 128 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 EIF4E3Q8N5X7 224 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 OR10J5Q8NHC4 309 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 LRFN3Q9BTN0 628 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 TMEM222Q9H0R3 208 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 PLEKHA2Q9HB19 425 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 TINAGQ9UJW2 476 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 UBE2J1Q9Y385 318 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 INTS1Q8N201 2190 aaKnown RBP10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 OR5H1A6NKK0 313 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 A8MXK9 166 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 KRBOX1C9JBD0 128 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 MBPP02686 304 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 RCC1P18754 421 aaPredicted RBP10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 KITLGP21583 273 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 S100GP29377 79 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF146Q15072 292 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF718Q3SXZ3 478 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 SHEQ5VZ18 495 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 TMEM268Q5VZI3 342 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 GAPTQ8N292 157 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 FAM169BQ8N8A8 192 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 BVESQ8NE79 360 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 KIRREL1Q96J84 757 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 DNTTIP1Q9H147 329 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 CXXC4Q9H2H0 198 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF292O60281 2723 aa10.97□□□□□ -0.65
SPTLC1-201ENST00000262554 IGHV2OR16-5A0A0B4J2B6 119 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 IGKV1D-13A0A0B4J2D9 117 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 E5RGE8 158 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 TEX46H3BTG2 121 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 MLNRO43193 412 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 CRYZL1O95825 349 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 IGKV1-13P0DP09 117 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 GCH1P30793 250 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 C1orf185Q5T7R7 199 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 PCSK4Q6UW60 755 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF497Q6ZNH5 498 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF695Q8IW36 515 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 RBMXL3Q8N7X1 1067 aaKnown RBP10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 SLC35G3Q8N808 338 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 SPERTQ8NA61 448 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 LHFPL5Q8TAF8 219 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 GLS2Q9UI32 602 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 NSG2Q9Y328 171 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 OR2W1Q9Y3N9 320 aa10.96□□□□□ -0.65
SPTLC1-201ENST00000262554 IGHV1-18A0A0C4DH31 117 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 IGHV3-64DA0A0J9YX35 117 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 HSD17B6O14756 317 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 MBNL2Q5VZF2 373 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 H1FOOQ8IZA3 346 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 GALNT11Q8NCW6 608 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 RNF141Q8WVD5 230 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 TMEM56Q96MV1 263 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 SLX1AQ9BQ83 275 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 BARX1Q9HBU1 254 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 OR2S2Q9NQN1 319 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 CCL28Q9NRJ3 127 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 NUP50Q9UKX7 468 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 TRAPPC2LQ9UL33 140 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 FAM215AQ9Y5M1 114 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 SLC25A15Q9Y619 301 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 TMEM56-RWDD3S4R434 201 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 NPIPB11E5RHQ5 1161 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 FGF16O43320 207 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 CDS2O95674 445 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 FABP6P51161 128 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 ZNF324BQ6AW86 544 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 EIF5AL1Q6IS14 154 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 PLPPR1Q8TBJ4 325 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 TMED6Q8WW62 240 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 IL1F10Q8WWZ1 152 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 LINC00052Q96N35 136 aa10.95□□□□□ -0.66
SPTLC1-201ENST00000262554 SPIN2AQ99865 258 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms